RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 APIPQ96GX9 242 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 NIPSNAP1Q9BPW8 284 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 CLMPQ9H6B4 373 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 NARFLQ9H6Q4 476 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 TPT1P8Q9HAU6 139 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 TMPRSS11EQ9UL52 423 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 SLC6A14Q9UN76 642 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 GLYATL1P3A0A0U1RQE8 302 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 MGAT4DA6NG13 374 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 J3KTA2 159 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 PLD2O14939 933 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 FZD6O60353 706 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 TRBC1P01850 177 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 CYP17A1P05093 508 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 PRKAR1AP10644 381 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 BNC1Q01954 994 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 ACSM2AQ08AH3 577 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 NFATC2Q13469 925 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 NCF4Q15080 339 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 UGT8Q16880 541 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 FLYWCH1Q4VC44 716 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 LYPLAL1Q5VWZ2 237 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 ACSM2BQ68CK6 577 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 BCDIN3DQ7Z5W3 292 aaKnown RBP9.26□□□□□ -0.93
VCAN-210ENST00000513960 GHDCQ8N2G8 530 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 ZBTB2Q8N680 514 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 AQP11Q8NBQ7 271 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 ATP6V1C2Q8NEY4 427 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 VPS37AQ8NEZ2 397 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 OR5AK3PQ8NH89 298 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 TRMT2BQ96GJ1 504 aaKnown RBP9.26□□□□□ -0.93
VCAN-210ENST00000513960 SPATA2Q9UM82 520 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 CLEC4AQ9UMR7 237 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 MAP4K5Q9Y4K4 846 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 SPIN1Q9Y657 262 aaPredicted RBP9.26□□□□□ -0.93
VCAN-210ENST00000513960 ANKRD36A6QL64 1941 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 CASP8AP2Q9UKL3 1982 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 PRAMEF33A0A0G2JMD5 474 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 LOC102723532A0A0G2JNH3 316 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 ISM1B1AKI9 464 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 FAM227AF5H4B4 570 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 OR10H3O60404 316 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 TPST2O60704 377 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 PRAMEF10O60809 474 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 ZNF780AO75290 641 aaPredicted RBP9.26□□□□□ -0.93
VCAN-210ENST00000513960 CLDN7O95471 211 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 ANXA5P08758 320 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 CYP2A6P11509 494 aaPredicted RBP9.26□□□□□ -0.93
VCAN-210ENST00000513960 CHI3L1P36222 383 aaPredicted RBP9.26□□□□□ -0.93
VCAN-210ENST00000513960 ATP6V1E1P36543 226 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 MAPK8P45983 427 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 NRIP1P48552 1158 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 POU4F3Q15319 338 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 CRTC2Q53ET0 693 aaPredicted RBP9.26□□□□□ -0.93
VCAN-210ENST00000513960 DDI2Q5TDH0 399 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 BBS7Q8IWZ6 715 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 CHAC2Q8WUX2 184 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 EID2BQ96D98 161 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 FAM129BQ96TA1 746 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 PKP4Q99569 1192 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 ZNF624Q9P2J8 865 aaPredicted RBP9.26□□□□□ -0.93
VCAN-210ENST00000513960 CLEC2DQ9UHP7 191 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 THSD7BQ9C0I4 1608 aa9.26□□□□□ -0.93
VCAN-210ENST00000513960 SLC35F4A4IF30 521 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 GRXCR2A6NFK2 248 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 ADAMDEC1O15204 470 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 OR7A10O76100 309 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 ABLIM3O94929 683 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 LATS1O95835 1130 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 IGSF6O95976 241 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 CKMP06732 381 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 ACPPP15309 386 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 GKP32189 559 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 RFX2P48378 723 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 MAN2A2P49641 1150 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 EFR3AQ14156 821 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 TXNDC8Q6A555 127 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 KRT74Q7RTS7 529 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 ZNF367Q7RTV3 350 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 CCDC190Q86UF4 302 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 MED8Q96G25 268 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 CRELD1Q96HD1 420 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 ACPTQ9BZG2 426 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 ELOVL2Q9NXB9 296 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 NPAP1Q9NZP6 1156 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 MAPRE3Q9UPY8 281 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 ERVW-1Q9UQF0 538 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 OARD1Q9Y530 152 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 PCDHGB2Q9Y5G2 931 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 ALG5Q9Y673 324 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 TET1Q8NFU7 2136 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 CHD5Q8TDI0 1954 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 SMAD6O43541 496 aaKnown RBP9.25□□□□□ -0.93
VCAN-210ENST00000513960 GBAP04062 536 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 SOD2P04179 222 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 URODP06132 367 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 APEX1P27695 318 aaKnown RBP9.25□□□□□ -0.93
VCAN-210ENST00000513960 SERPINA4P29622 427 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 CNR2P34972 360 aa9.25□□□□□ -0.93
VCAN-210ENST00000513960 GPC1P35052 558 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms