RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 LRRC36Q1X8D7 754 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 PRRT3Q5FWE3 981 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 MANEAQ5SRI9 462 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 ANKRD26P1Q6NSI1 321 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 ABHD17CQ6PCB6 329 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 CCDC80Q76M96 950 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 PTOV1Q86YD1 416 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 SLC30A8Q8IWU4 369 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 NAGSQ8N159 534 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 C10orf111Q8N326 155 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 OR52N2Q8NGI0 321 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 OR4A15Q8NGL6 344 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 CDC26Q8NHZ8 85 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 NETO1Q8TDF5 533 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 FIG4Q92562 907 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 RSC1A1Q92681 617 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 FAM162AQ96A26 154 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 PPWD1Q96BP3 646 aaKnown RBP7.97□□□□□ -1.13
RNF4-220ENST00000513578 AURKBQ96GD4 344 aaPredicted RBP7.97□□□□□ -1.13
RNF4-220ENST00000513578 SMIM10Q96HG1 83 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 PYURFQ96I23 114 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 RNF145Q96MT1 663 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 KCNC2Q96PR1 638 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 BDH2Q9BUT1 245 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 FAIM2Q9BWQ8 316 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 CHID1Q9BWS9 393 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 OSBPL11Q9BXB4 747 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 ASPSCR1Q9BZE9 553 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 TRIM4Q9C037 500 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 ROGDIQ9GZN7 287 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 AICDAQ9GZX7 198 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 TMEM38AQ9H6F2 299 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 EPS8L2Q9H6S3 715 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 COQ10BQ9H8M1 238 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 MIEF1Q9NQG6 463 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 CPNE7Q9UBL6 633 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 SPASTQ9UBP0 616 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 DNAJB9Q9UBS3 223 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 PILRAQ9UKJ1 303 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 FBXL21Q9UKT6 434 aa7.97□□□□□ -1.13
RNF4-220ENST00000513578 SAMD4AQ9UPU9 718 aaKnown RBP7.97□□□□□ -1.13
RNF4-220ENST00000513578 TNRC6BQ9UPQ9 1833 aaKnown RBP7.96□□□□□ -1.13
RNF4-220ENST00000513578 CCDC163A0A0D9SF12 145 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 C2orf74A8MZ97 194 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 CLOCKO15516 846 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 ZW10O43264 779 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 TMPRSS11DO60235 418 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 DPM1O60762 260 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 TNFRSF21O75509 655 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 RASAL1O95294 804 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 C6orf47O95873 294 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 CSF2P04141 144 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 SEMG1P04279 462 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 CTSEP14091 401 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 UGT2B7P16662 529 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 HIST1H1TP22492 207 aaPredicted RBP7.96□□□□□ -1.14
RNF4-220ENST00000513578 ATP5A1P25705 553 aaKnown RBP7.96□□□□□ -1.14
RNF4-220ENST00000513578 CD38P28907 300 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 HOXA6P31267 233 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 KDELR2P33947 212 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 PCGF2P35227 344 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 MAGEA2P43356 314 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 FASLGP48023 281 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 CYP4F2P78329 520 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 TXNL4AP83876 142 aaKnown RBP7.96□□□□□ -1.14
RNF4-220ENST00000513578 RGS1Q08116 209 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 GAB1Q13480 694 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 BIRC2Q13490 618 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 SLC9A5Q14940 896 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 ELOCQ15369 112 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 CEBPEQ15744 281 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 ADRM1Q16186 407 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 PRSS53Q2L4Q9 553 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.96□□□□□ -1.14
RNF4-220ENST00000513578 FCRL6Q6DN72 434 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 ZCCHC8Q6NZY4 707 aaKnown RBP7.96□□□□□ -1.14
RNF4-220ENST00000513578 FBXO42Q6P3S6 717 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 TRIM40Q6P9F5 258 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 ZBTB49Q6ZSB9 765 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 TMEM26Q6ZUK4 368 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 CBLL1Q75N03 491 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 EIF3MQ7L2H7 374 aaKnown RBP7.96□□□□□ -1.14
RNF4-220ENST00000513578 VN1R4Q7Z5H5 301 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 ADCK2Q7Z695 626 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 AMIGO2Q86SJ2 522 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 ASPGQ86U10 573 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 C17orf82Q86X59 251 aaPredicted RBP7.96□□□□□ -1.14
RNF4-220ENST00000513578 TRIM48Q8IWZ4 208 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 PJA1Q8NG27 643 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 C1orf216Q8TAB5 229 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 SLC37A2Q8TED4 501 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 DNASE2BQ8WZ79 361 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 GAL3ST3Q96A11 431 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 MS4A3Q96HJ5 214 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 SLC6A18Q96N87 628 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 TEFMQ96QE5 360 aaKnown RBP7.96□□□□□ -1.14
RNF4-220ENST00000513578 OR2A5Q96R48 311 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 SORBS1Q9BX66 1292 aaKnown RBP7.96□□□□□ -1.14
RNF4-220ENST00000513578 OSBPL10Q9BXB5 764 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 FOXQ1Q9C009 403 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms