RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 FOXO1Q12778 655 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 PWP1Q13610 501 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 KCNJ11Q14654 390 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 DEFB134Q4QY38 66 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 PCID2Q5JVF3 399 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 RNF187Q5TA31 235 aaPredicted RBP10.71□□□□□ -0.69
RNF4-216ENST00000511859 MRNIPQ6NTE8 343 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 POMZP3Q6PJE2 187 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 RTL4Q6ZR62 310 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 ZNF662Q6ZS27 426 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 SEM1Q6ZVN7 128 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 ULK2Q8IYT8 1036 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 GOLM1Q8NBJ4 401 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 MFSD9Q8NBP5 474 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 ZNF740Q8NDX6 193 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 ASB11Q8WXH4 323 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 SMPDL3BQ92485 455 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 SGCZQ96LD1 299 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 DACH2Q96NX9 599 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 TCF12Q99081 682 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 CCDC177Q9NQR7 707 aaPredicted RBP10.71□□□□□ -0.69
RNF4-216ENST00000511859 NECTIN3Q9NQS3 549 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 ZFATQ9P243 1243 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 MYOTQ9UBF9 498 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 AMFRQ9UKV5 643 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.71□□□□□ -0.69
RNF4-216ENST00000511859 DOCK7Q96N67 2140 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 A0A0G2JMM0 328 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 A0A1W2PPB8 328 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 A0A1W2PRS3 328 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 KIR3DP1A8MWS1 328 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 E5RI56 91 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 E7EVH7 732 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 PSMD12O00232 456 aaPredicted RBP10.7□□□□□ -0.7
RNF4-216ENST00000511859 OR6B1O95007 311 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 IL2RAP01589 272 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 IMPA1P29218 277 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 STIP1P31948 543 aaKnown RBP10.7□□□□□ -0.7
RNF4-216ENST00000511859 FDFT1P37268 417 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 GRIA1P42261 906 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 GDF10P55107 478 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 RWDD2BP57060 319 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 OLR1P78380 273 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 HYAL2Q12891 473 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 ZNF750Q32MQ0 723 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 XKR6Q5GH73 641 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 HECTD2Q5U5R9 776 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 PODNL1Q6PEZ8 512 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 FAM47EQ6ZV65 393 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 ABHD13Q7L211 337 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 YTHDF3Q7Z739 585 aaKnown RBP10.7□□□□□ -0.7
RNF4-216ENST00000511859 C17orf64Q86WR6 236 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 PHC2Q8IXK0 858 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 SYCE1Q8N0S2 351 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 SLC35F6Q8N357 371 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 VWA5B2Q8N398 1253 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 NAXEQ8NCW5 288 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 TNIP2Q8NFZ5 429 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 TMEM158Q8WZ71 300 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 LPGAT1Q92604 370 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 FAM136AQ96C01 138 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 CALR3Q96L12 384 aaKnown RBP10.7□□□□□ -0.7
RNF4-216ENST00000511859 AARSD1Q9BTE6 412 aaKnown RBP10.7□□□□□ -0.7
RNF4-216ENST00000511859 ETNK1Q9HBU6 452 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 TREX1Q9NSU2 369 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 SACM1LQ9NTJ5 587 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 GALPQ9UBC7 116 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 ZNF223Q9UK11 482 aaPredicted RBP10.7□□□□□ -0.7
RNF4-216ENST00000511859 ZKSCAN5Q9Y2L8 839 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 MMACHCQ9Y4U1 282 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 KIAA1549Q9HCM3 1950 aa10.7□□□□□ -0.7
RNF4-216ENST00000511859 ROS1P08922 2347 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 ANK2Q01484 3957 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 A0A1W2PPR1 153 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 NDUFS4O43181 175 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 CEP104O60308 925 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 AVILO75366 819 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 IFNA2P01563 188 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 CELA3AP09093 270 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 MPC1LP0DKB6 136 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 RNH1P13489 461 aaKnown RBP10.69□□□□□ -0.7
RNF4-216ENST00000511859 ENDOUP21128 410 aaKnown RBP10.69□□□□□ -0.7
RNF4-216ENST00000511859 CCND1P24385 295 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 SOX3P41225 446 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 CBLBQ13191 982 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 SF3B4Q15427 424 aaKnown RBP eCLIP10.69□□□□□ -0.73e-8■■■□□ 15.6
RNF4-216ENST00000511859 TTLL9Q3SXZ7 439 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 BBS9Q3SYG4 887 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 HMBOX1Q6NT76 420 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 AADACL2Q6P093 401 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 LACC1Q8IV20 430 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 OTUD6BQ8N6M0 293 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 TRIM58Q8NG06 486 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 NCLNQ969V3 563 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 RASL10BQ96S79 203 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 ACKR4Q9NPB9 350 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 PNO1Q9NRX1 252 aaKnown RBP10.69□□□□□ -0.7
RNF4-216ENST00000511859 KLHL42Q9P2K6 505 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 SPRR3Q9UBC9 169 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 CRYL1Q9Y2S2 319 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms