RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 TTC34A8MYJ7 566 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 FAM47E-STBD1D6RA91 191 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 B4GALT3O60512 393 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 POP4O95707 220 aaKnown RBP14.3□□□□□ -0.12
USP38-202ENST00000510377 H1F0P07305 194 aaKnown RBP14.3□□□□□ -0.12
USP38-202ENST00000510377 HNRNPFP52597 415 aaKnown RBP14.3□□□□□ -0.12
USP38-202ENST00000510377 RPS26P11Q5JNZ5 115 aaPredicted RBP14.3□□□□□ -0.12
USP38-202ENST00000510377 ZNF367Q7RTV3 350 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 MSRB3Q8IXL7 192 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 C7orf61Q8IZ16 206 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 RAB42Q8N4Z0 105 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 CELF5Q8N6W0 485 aaKnown RBP14.3□□□□□ -0.12
USP38-202ENST00000510377 LRRC17Q8N6Y2 441 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 PAWRQ96IZ0 340 aaKnown RBP14.3□□□□□ -0.12
USP38-202ENST00000510377 TRIB3Q96RU7 358 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 MAPKAP1Q9BPZ7 522 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 DUSP21Q9H596 190 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 RLIMQ9NVW2 624 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 CMAHPQ9Y471 501 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 LTBP1Q14766 1721 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 RBBP6Q7Z6E9 1792 aaKnown RBP14.3□□□□□ -0.12
USP38-202ENST00000510377 THSD7AQ9UPZ6 1657 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 GABRR3A8MPY1 467 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 ANKRD28O15084 1053 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 SPNP16150 400 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 PTX3P26022 381 aaPredicted RBP14.3□□□□□ -0.12
USP38-202ENST00000510377 NOS3P29474 1203 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 CRISP1P54107 249 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 SMIM11AP58511 58 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 MLLT1Q03111 559 aaPredicted RBP14.3□□□□□ -0.12
USP38-202ENST00000510377 AGAP6Q5VW22 663 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 ZNF730Q6ZMV8 503 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 DPY19L3Q6ZPD9 716 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 CBLL1Q75N03 491 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 SERPINA11Q86U17 422 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 OXR1Q8N573 874 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 CYB5D2Q8WUJ1 264 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 KCTD7Q96MP8 289 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 AGAP4Q96P64 663 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 ALOXE3Q9BYJ1 711 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 OR2AG1Q9H205 316 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 Q9Y3F1 56 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 TRAV19A0A0A6YYK7 116 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 OR2A25A4D2G3 310 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 ACRP10323 421 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 ETV3P41162 512 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 SSR2P43308 183 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 CSTF1Q05048 431 aaKnown RBP14.3□□□□□ -0.12
USP38-202ENST00000510377 PTGES3Q15185 160 aaKnown RBP14.3□□□□□ -0.12
USP38-202ENST00000510377 SMU1Q2TAY7 513 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 SDE2Q6IQ49 451 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 CRTC1Q6UUV9 634 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 DNAJC22Q8N4W6 341 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 SLC9A6Q92581 669 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 EFHD2Q96C19 240 aaPredicted RBP14.3□□□□□ -0.12
USP38-202ENST00000510377 C11orf24Q96F05 449 aaPredicted RBP14.3□□□□□ -0.12
USP38-202ENST00000510377 NIPSNAP1Q9BPW8 284 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 NEU3Q9UQ49 428 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 A0A1W2PRU2 124 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 METTL15A6NJ78 407 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 CCL5P13501 91 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 IFITM3Q01628 133 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 PRSS36Q5K4E3 855 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 KDM4DQ6B0I6 523 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 MZT2AQ6P582 158 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 SMARCD3Q6STE5 483 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 FLCNQ8NFG4 579 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 TMEM80Q96HE8 168 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 PIP5K1AQ99755 562 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 ZCCHC2Q9C0B9 1178 aaKnown RBP14.29□□□□□ -0.12
USP38-202ENST00000510377 OR2B2Q9GZK3 357 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 CLDN24A6NM45 220 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 PRSS23O95084 383 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 CBSLP0DN79 551 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 CBSP35520 551 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 LMAN2Q12907 356 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 ARID1BQ8NFD5 2236 aaPredicted RBP14.29□□□□□ -0.12
USP38-202ENST00000510377 A0A1W2PQ09 198 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 SCAMP2O15127 329 aaKnown RBP14.29□□□□□ -0.12
USP38-202ENST00000510377 PCDH8O95206 1070 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 SLC16A8O95907 504 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 HOXD8P13378 290 aaPredicted RBP14.29□□□□□ -0.12
USP38-202ENST00000510377 ZNF763Q0D2J5 394 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 UGT8Q16880 541 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 IDNKQ5T6J7 187 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 LHFPL3Q86UP9 236 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 C17orf64Q86WR6 236 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 MARCH9Q86YJ5 346 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 C10orf111Q8N326 155 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 NECTIN4Q96NY8 510 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 CLEC4MQ9H2X3 399 aaPredicted RBP14.29□□□□□ -0.12
USP38-202ENST00000510377 IGFLR1Q9H665 355 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 ZCCHC3Q9NUD5 404 aaKnown RBP14.29□□□□□ -0.12
USP38-202ENST00000510377 TMEM45AQ9NWC5 275 aa14.29□□□□□ -0.12
USP38-202ENST00000510377 SSNA1O43805 119 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 GALTP07902 379 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 RACK1P63244 317 aaKnown RBP14.28□□□□□ -0.12
USP38-202ENST00000510377 SELENOWP63302 87 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 SPIN4Q56A73 249 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 ARSIQ5FYB1 569 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms