RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 MRPL52Q86TS9 123 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 PIGZQ86VD9 579 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 PPP1R3BQ86XI6 285 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 PTRH1Q86Y79 214 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 MCEMP1Q8IX19 187 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 PRSS35Q8N3Z0 413 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 FAM156AQ8NDB6 213 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 ZNF248Q8NDW4 579 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 OR2L3Q8NG85 312 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 SELENOMQ8WWX9 145 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 ATG4CQ96DT6 458 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 L3HYPDHQ96EM0 354 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 CALML4Q96GE6 196 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 BBS2Q9BXC9 721 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 PARD6AQ9NPB6 346 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 SCN3BQ9NY72 215 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 IL19Q9UHD0 177 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 AJAP1Q9UKB5 411 aaPredicted RBP10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 CDV3Q9UKY7 258 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 DNPEPQ9ULA0 475 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 KIAA1024Q9UPX6 916 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 WASF3Q9UPY6 502 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 SCN7AQ01118 1682 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 IQCMA0A1B0GVH7 501 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 BBIP1A8MTZ0 92 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 GPR89AB7ZAQ6 455 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 TSTD3H0UI37 97 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 TEX46H3BTG2 121 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 J3KRW8 73 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 ADAMDEC1O15204 470 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 PLA2G10O15496 165 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 PPIHO43447 177 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 RGS10O43665 173 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 CTNSO60931 367 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 SLC22A3O75751 556 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 HSPA4LO95757 839 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 STARD3NLO95772 234 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 GPR89BP0CG08 455 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 CYP4B1P13584 511 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 IFNGR1P15260 489 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 GALP22466 123 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 ZNF81P51508 661 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 ZNF280AP59817 542 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 FOXM1Q08050 763 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 TFCP2Q12800 502 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 GPS1Q13098 491 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 EIF4EBP2Q13542 120 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 SEMA5AQ13591 1074 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 IMPG1Q17R60 797 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 FAM74A1Q5RGS3 127 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 C10orf91Q5T1B1 145 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 LCN1P1Q5VSP4 162 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 C19orf48Q6RUI8 117 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 PRSS58Q8IYP2 241 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 LRRC18Q8N456 261 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 STOML3Q8TAV4 291 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 METTL21AQ8WXB1 218 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 KAT2AQ92830 837 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 UCN3Q969E3 161 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 RPL10LQ96L21 214 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 PCDHB18PQ96TA0 734 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 HOPXQ9BPY8 73 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 TREM1Q9NP99 234 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 SIRT7Q9NRC8 400 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 AKAP7Q9P0M2 348 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 FBXL2Q9UKC9 423 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 TMEM184BQ9Y519 407 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 ASB1Q9Y576 335 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 TJP1Q07157 1748 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 TCRBV5S2A0A599 114 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 FAM149AA5PLN7 773 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 USP17L4A6NCW7 530 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 GLTPD2A6NH11 291 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 IQCF5A8MTL0 148 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 RNF223E7ERA6 249 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 NPIPB9F8W1W9 429 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 M0QYT0 321 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 ANKRD28O15084 1053 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 SMPD2O60906 423 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 PCDH8O95206 1070 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 LGI1O95970 557 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 MPOP05164 745 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 GJB1P08034 283 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 CSF3P09919 207 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 HNF1AP20823 631 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 ICAM3P32942 547 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 CCR5P51681 352 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 SUOXP51687 545 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 GABPAQ06546 454 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 CDK5R2Q13319 367 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 CAMK2DQ13557 499 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 ARHGEF7Q14155 803 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 NR6A1Q15406 480 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 MEP1AQ16819 746 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 PTPRNQ16849 979 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 ZNF772Q68DY9 489 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 MEX3BQ6ZN04 569 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 ZCCHC23Q6ZST2 131 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 SMIM15Q7Z3B0 74 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 IQCHQ86VS3 1027 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms