RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 CD274Q9NZQ7 290 aa13.5□□□□□ -0.25
HMGCS1-203ENST00000507004 ADGRE2Q9UHX3 823 aa13.5□□□□□ -0.25
HMGCS1-203ENST00000507004 RNF112Q9ULX5 631 aa13.5□□□□□ -0.25
HMGCS1-203ENST00000507004 NCF1BA6NI72 391 aaPredicted RBP13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 SYCE1LA8MT33 242 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 NCF1CA8MVU1 366 aaPredicted RBP13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 PRSS44E7EML9 344 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 RAD51CO43502 376 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 NME2P1O60361 137 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 NCF1P14598 390 aaPredicted RBP13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 MAOAP21397 527 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 NME2P22392 152 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 TPP2P29144 1249 aaPredicted RBP13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 CASP2P42575 452 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 GDF5P43026 501 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 KCNC1P48547 511 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 BTG2P78543 158 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 IRF8Q02556 426 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 SLC13A2Q13183 592 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 BIKQ13323 160 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 SERTAD2Q14140 314 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 MAPKAPK3Q16644 382 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 TMEM35AQ53FP2 167 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 XKR6Q5GH73 641 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 ZNF787Q6DD87 383 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 Q6ZPB1 254 aaPredicted RBP13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 MRGPRGQ86SM5 289 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 SNX31Q8N9S9 440 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 DAZLQ92904 295 aaKnown RBP13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 FRMD6Q96NE9 622 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 KCNC2Q96PR1 638 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 NPAS2Q99743 824 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 CENPKQ9BS16 269 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 TMEM79Q9BSE2 394 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 TBCDQ9BTW9 1192 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 LYRM4Q9HD34 91 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 NECTIN3Q9NQS3 549 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 KLHL1Q9NR64 748 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 SMYD2Q9NRG4 433 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 PTBP2Q9UKA9 531 aaKnown RBP13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 ZNF835Q9Y2P0 537 aa13.49□□□□□ -0.25
HMGCS1-203ENST00000507004 FAM227AF5H4B4 570 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 TAPBPO15533 448 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 PHGDHO43175 533 aaKnown RBP13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 ASNA1O43681 348 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 CTNSO60931 367 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 ZFAND5O76080 213 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 MYO1DO94832 1006 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 B3GALT4O96024 378 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 ZNF24P17028 368 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 COL8A1P27658 744 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 HSPA7P48741 367 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 ARFIP1P53367 373 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 PLTPP55058 493 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 ETF1P62495 437 aaKnown RBP13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 CKAP4Q07065 602 aaKnown RBP13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 PCDH1Q08174 1060 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 E2F2Q14209 437 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 ELAVL1Q15717 326 aaKnown RBP13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 ABHD17CQ6PCB6 329 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 RAPH1Q70E73 1250 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 CHSY3Q70JA7 882 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 SPPL2CQ8IUH8 684 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 TMEM156Q8N614 296 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 APCDD1LQ8NCL9 501 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 CCDC120Q96HB5 630 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 QRFPRQ96P65 431 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 CD244Q9BZW8 370 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 ANKRD10Q9NXR5 420 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 GRHL1Q9NZI5 618 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 PYCARDQ9ULZ3 195 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 DAPP1Q9UN19 280 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 YARS2Q9Y2Z4 477 aaKnown RBP13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 CREBBPQ92793 2442 aa13.48□□□□□ -0.25
HMGCS1-203ENST00000507004 TRBV11-1A0A0K0K1C0 115 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 CXorf49A8MYA2 514 aaPredicted RBP13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 NPIPA5E9PKD4 350 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 PRRG2O14669 202 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 CCNT2O60583 730 aaKnown RBP13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 KERAO60938 352 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 DNAJB6O75190 326 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 HNRNPH1P31943 449 aaKnown RBP13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 PTGER4P35408 488 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 MAGEA4P43358 317 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 PLA2G16P53816 162 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 PMP22Q01453 160 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 CHIT1Q13231 466 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 RUNX2Q13950 521 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 DOC2AQ14183 400 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 SP5Q6BEB4 398 aaPredicted RBP13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 MED27Q6P2C8 311 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 SHISA5Q8N114 240 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 KIF2BQ8N4N8 673 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 PPM1NQ8N819 430 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 MORN4Q8NDC4 146 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 OR8K3Q8NH51 312 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 OR14A16Q8NHC5 309 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 RHEBL1Q8TAI7 183 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 PHF10Q8WUB8 498 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms