RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 DYRK3O43781 588 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 PRMT3O60678 531 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 TBX19O60806 448 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 LYPLA1O75608 230 aaPredicted RBP8□□□□□ -1.13
PDGFC-205ENST00000506880 KLF7O75840 302 aaPredicted RBP8□□□□□ -1.13
PDGFC-205ENST00000506880 SOX30O94993 753 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 OR4F21O95013 312 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 FHP07954 510 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 C1QTNF9P0C862 333 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 ZNF888P0CJ79 500 aaPredicted RBP8□□□□□ -1.13
PDGFC-205ENST00000506880 PCNAP12004 261 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 ZNF28P17035 718 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 SPINK2P20155 84 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 NR1D1P20393 614 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 ATP5A1P25705 553 aaKnown RBP8□□□□□ -1.13
PDGFC-205ENST00000506880 SSR2P43308 183 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 SLC1A6P48664 564 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 RPL14P50914 215 aaKnown RBP8□□□□□ -1.13
PDGFC-205ENST00000506880 CDH13P55290 713 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 CLDN6P56747 220 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 C21orf58P58505 322 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 YBX1P67809 324 aaKnown RBP8□□□□□ -1.13
PDGFC-205ENST00000506880 HEPACAMQ14CZ8 416 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 C18orf21Q32NC0 220 aaPredicted RBP8□□□□□ -1.13
PDGFC-205ENST00000506880 TOR1AIP1Q5JTV8 583 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 MRM1Q6IN84 353 aaKnown RBP8□□□□□ -1.13
PDGFC-205ENST00000506880 JMJD6Q6NYC1 403 aaPredicted RBP8□□□□□ -1.13
PDGFC-205ENST00000506880 TMEM205Q6UW68 189 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 VN1R5Q7Z5H4 357 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 ZFAND4Q86XD8 727 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 FAM20CQ8IXL6 584 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 LGI4Q8N135 537 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 CDYL2Q8N8U2 506 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 ACOT4Q8N9L9 421 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 KCT2Q8NC54 265 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 OR51Q1Q8NH59 317 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 MDM1Q8TC05 714 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 STT3BQ8TCJ2 826 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 CT55Q8WUE5 264 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 CHTF18Q8WVB6 975 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 METTL21AQ8WXB1 218 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 ESAMQ96AP7 390 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 MTERF3Q96E29 417 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 ART5Q96L15 291 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 FCRL1Q96LA6 429 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 NSUN5Q96P11 429 aaKnown RBP8□□□□□ -1.13
PDGFC-205ENST00000506880 SPSB2Q99619 263 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 NRTNQ99748 197 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 SPNS1Q9H2V7 528 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 CCDC134Q9H6E4 229 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 MANSC1Q9H8J5 431 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 PRDM7Q9NQW5 492 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 INTS9Q9NV88 658 aaKnown RBP8□□□□□ -1.13
PDGFC-205ENST00000506880 TAS2R7Q9NYW3 318 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 DHCR7Q9UBM7 475 aaKnown RBP8□□□□□ -1.13
PDGFC-205ENST00000506880 TRPC4Q9UBN4 977 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 PPIEQ9UNP9 301 aaKnown RBP8□□□□□ -1.13
PDGFC-205ENST00000506880 NAALAD2Q9Y3Q0 740 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 COL6A6A6NMZ7 2263 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 A0A0A6YYD5 115 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 LOC101059948A0A1B0GTJ6 334 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 C1orf226A1L170 272 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 PLPP1O14494 284 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 EFSO43281 561 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 CTNSO60931 367 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 HSPA4LO95757 839 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 TBX6O95947 436 aaPredicted RBP7.99□□□□□ -1.13
PDGFC-205ENST00000506880 PDYNP01213 254 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 SERPIND1P05546 499 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 LIFP15018 202 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 HNRNPH1P31943 449 aaKnown RBP7.99□□□□□ -1.13
PDGFC-205ENST00000506880 BSGP35613 385 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 GMPRP36959 345 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 XCR1P46094 333 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 WDR4P57081 412 aaKnown RBP7.99□□□□□ -1.13
PDGFC-205ENST00000506880 RPS13P62277 151 aaKnown RBP7.99□□□□□ -1.13
PDGFC-205ENST00000506880 IGLV3-21P80748 117 aaPredicted RBP7.99□□□□□ -1.13
PDGFC-205ENST00000506880 LRRC74AQ0VAA2 488 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 CHI3L2Q15782 390 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 EXT1Q16394 746 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 IMPG1Q17R60 797 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 DPY19L1Q2PZI1 675 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 DEFB134Q4QY38 66 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 XKR7Q5GH72 579 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 OGFOD2Q6N063 350 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 CYP20A1Q6UW02 462 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 COX15Q7KZN9 410 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 GPR180Q86V85 440 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 WDR75Q8IWA0 830 aaKnown RBP7.99□□□□□ -1.13
PDGFC-205ENST00000506880 ENDOVQ8N8Q3 282 aaKnown RBP7.99□□□□□ -1.13
PDGFC-205ENST00000506880 PIWIL2Q8TC59 973 aaKnown RBP7.99□□□□□ -1.13
PDGFC-205ENST00000506880 LRRC8CQ8TDW0 803 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 ADAMTS17Q8TE56 1095 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 DOCK10Q96BY6 2186 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 MAGEB18Q96M61 343 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 MTERF1Q99551 399 aaKnown RBP7.99□□□□□ -1.13
PDGFC-205ENST00000506880 TUBB6Q9BUF5 446 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 ACTL8Q9H568 366 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.99□□□□□ -1.13
PDGFC-205ENST00000506880 C1orf109Q9NX04 203 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms