RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 HKDC1Q2TB90 917 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 KRT71Q3SY84 523 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 TMEM119Q4V9L6 283 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 TMEM35AQ53FP2 167 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 PPP6R3Q5H9R7 873 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 PAPPA-AS1Q5QFB9 102 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 C10orf120Q5SQS8 335 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 GRTP1Q5TC63 336 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 NDUFAF5Q5TEU4 345 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 LIPJQ5W064 366 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZNF770Q6IQ21 691 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 BZW1Q7L1Q6 419 aaKnown RBP3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 GPR141Q7Z602 305 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 GRASPQ7Z6J2 395 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 LHFPL4Q7Z7J7 247 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 LUZP2Q86TE4 346 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 BIVMQ86UB2 503 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 ADGRG3Q86Y34 549 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 ECHDC2Q86YB7 292 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 PTOV1Q86YD1 416 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 GPSM1Q86YR5 675 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 TMEM139Q8IV31 216 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 VSTM4Q8IW00 320 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 FOXRED2Q8IWF2 684 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 COMMD1Q8N668 190 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 ANKFN1Q8N957 763 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 MLKLQ8NB16 471 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 SYT8Q8NBV8 401 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 DDHD1Q8NEL9 900 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 OR4C15Q8NGM1 316 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 TMEM174Q8WUU8 243 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 IRGQQ8WZA9 623 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 NRBF2Q96F24 287 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 RITA1Q96K30 269 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 APOLD1Q96LR9 279 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 FAM20AQ96MK3 541 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 CHP1Q99653 195 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 CCDC3Q9BQI4 270 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 SH2D3AQ9BRG2 576 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 MMTAG2Q9BU76 263 aaKnown RBP3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 C1QTNF7Q9BXJ2 289 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 ROPN1BQ9BZX4 212 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 KLHL31Q9H511 634 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 Q9H8V8 135 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 CLK4Q9HAZ1 481 aaKnown RBP3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 ELOVL3Q9HB03 270 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 PDGFCQ9NRA1 345 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 THSD1Q9NS62 852 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 ECHDC1Q9NTX5 307 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 RNF186Q9NXI6 227 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 PLEK2Q9NYT0 353 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 ONECUT1Q9UBC0 465 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 CNOT11Q9UKZ1 510 aaKnown RBP3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZNF490Q9ULM2 529 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 PACSIN2Q9UNF0 486 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 FZD1Q9UP38 647 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 NIP7Q9Y221 180 aaKnown RBP eCLIP3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 ETV7Q9Y603 341 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZHX2Q9Y6X8 837 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 PTPRCP08575 1304 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 PHLPP2Q6ZVD8 1323 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 LOC100653049A0A140TA62 436 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 A0A1W2PRB8 838 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 ESYT2A0FGR8 921 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 OR5K3A6NET4 321 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 ANTXRLA6NF34 631 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 ACOD1A6NK06 481 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 ASB14A6NK59 587 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 YJEFN3A6XGL0 299 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 TCP11X1B4DZS4 312 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 WASH3PC4AMC7 463 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 FOXE1O00358 373 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 MDM4O15151 490 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 ALOX15BO15296 676 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 AKR7A2O43488 359 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 BUD23O43709 281 aaKnown RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 OR1F1O43749 312 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 KRT86O43790 486 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 CIDEAO60543 219 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 FOXD2O60548 495 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 FCMRO60667 390 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 KRT34O76011 436 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 LGI1O95970 557 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 OTCP00480 354 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 RAF1P04049 648 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 APRTP07741 180 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 ODC1P11926 461 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 F3P13726 295 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 ANPEPP15144 967 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 TAL1P17542 331 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 POLR2CP19387 275 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 TPSB2P20231 275 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 PSMA2P25787 234 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 ACRV1P26436 265 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 CD1BP29016 333 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 RFC2P35250 354 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 FDFT1P37268 417 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 PPT1P50897 306 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 LINC00310P59036 64 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 SEC61BP60468 96 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms