RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 PTPRBP23467 1997 aa19.33■□□□□ 0.68
CDC42SE2-206ENST00000503291 DCHS1Q96JQ0 3298 aa19.33■□□□□ 0.68
CDC42SE2-206ENST00000503291 B3GALT2O43825 422 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 NSA2O95478 260 aaKnown RBP19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 NIPAL1Q6NVV3 410 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 ANKS4BQ8N8V4 417 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 CLIP3Q96DZ5 547 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 MVB12AQ96EY5 273 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 MMABQ96EY8 250 aaPredicted RBP19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 EGLN2Q96KS0 407 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 GPR45Q9Y5Y3 372 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 SEC16AO15027 2179 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 WDFY3Q8IZQ1 3526 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 DSCR3O14972 297 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 FAM58BPP0C7Q3 252 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 PRPS2P11908 318 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 IDO1P14902 403 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 AVPR1BP47901 424 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 SKP1P63208 163 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 OLR1P78380 273 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 RUNX2Q13950 521 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 PTGR1Q14914 329 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 GSTA3Q16772 222 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 C1orf189Q5VU69 101 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 CACNA2D3Q8IZS8 1091 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 OR5T3Q8NGG3 340 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 TSSK3Q96PN8 268 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 ASPSCR1Q9BZE9 553 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 TMEM184BQ9Y519 407 aaPredicted RBP19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 MAU2Q9Y6X3 613 aa19.32■□□□□ 0.68
CDC42SE2-206ENST00000503291 A0A1B0GX78 115 aa19.31■□□□□ 0.68
CDC42SE2-206ENST00000503291 H0YIG0 161 aa19.31■□□□□ 0.68
CDC42SE2-206ENST00000503291 RDH16O75452 317 aa19.31■□□□□ 0.68
CDC42SE2-206ENST00000503291 HBQ1P09105 142 aa19.31■□□□□ 0.68
CDC42SE2-206ENST00000503291 ZNF28P17035 718 aa19.31■□□□□ 0.68
CDC42SE2-206ENST00000503291 ZNF763Q0D2J5 394 aa19.31■□□□□ 0.68
CDC42SE2-206ENST00000503291 RPS6KA2Q15349 733 aa19.31■□□□□ 0.68
CDC42SE2-206ENST00000503291 MRM1Q6IN84 353 aaKnown RBP19.31■□□□□ 0.68
CDC42SE2-206ENST00000503291 MTDHQ86UE4 582 aaKnown RBP19.31■□□□□ 0.68
CDC42SE2-206ENST00000503291 CLHC1Q8NHS4 586 aa19.31■□□□□ 0.68
CDC42SE2-206ENST00000503291 C16orf78Q8WTQ4 265 aa19.31■□□□□ 0.68
CDC42SE2-206ENST00000503291 DDA1Q9BW61 102 aa19.31■□□□□ 0.68
CDC42SE2-206ENST00000503291 FBXW2Q9UKT8 454 aa19.31■□□□□ 0.68
CDC42SE2-206ENST00000503291 CDC14AQ9UNH5 594 aa19.31■□□□□ 0.68
CDC42SE2-206ENST00000503291 COPG1Q9Y678 874 aaKnown RBP19.31■□□□□ 0.68
CDC42SE2-206ENST00000503291 OR1D4P47884 311 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 TAS2R50P59544 299 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 PRMT9Q6P2P2 845 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 SHISA5Q8N114 240 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.3■□□□□ 0.682e-14■■■■■ 37.5
CDC42SE2-206ENST00000503291 TM4SF18Q96CE8 201 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 ZPBPQ9BS86 351 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 NPLQ9BXD5 320 aaPredicted RBP19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 ULBP3Q9BZM4 244 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 BRINP2Q9C0B6 783 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 NMUR2Q9GZQ4 415 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 SAR1AQ9NR31 198 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 DAPP1Q9UN19 280 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 ASB4Q9Y574 426 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 CCDC22O60826 627 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 KIAA0754O94854 1291 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 ATXN8OSP0DMR3 200 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 LIM2P55344 173 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 HNRNPH2P55795 449 aaKnown RBP19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 NME5P56597 212 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 TMEM164Q5U3C3 297 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 CDC26Q8NHZ8 85 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 GBP5Q96PP8 586 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 MAPKAP1Q9BPZ7 522 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 SDR39U1Q9NRG7 319 aaPredicted RBP19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 KCMF1Q9P0J7 381 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 ATG4BQ9Y4P1 393 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 PCDHGA8Q9Y5G5 932 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 PCDHGA3Q9Y5H0 932 aa19.3■□□□□ 0.68
CDC42SE2-206ENST00000503291 C9orf172C9J069 976 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 CPNE3O75131 537 aaKnown RBP19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 TNFSF15O95150 251 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 TRA2BP62995 288 aaKnown RBP19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 MAT1AQ00266 395 aaKnown RBP19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 PUM1Q14671 1186 aaKnown RBP eCLIP19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 CLNKQ7Z7G1 428 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 GPR180Q86V85 440 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 ACTL8Q9H568 366 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 ZNF385DQ9H6B1 395 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 ZNF304Q9HCX3 659 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 LYARQ9NX58 379 aaKnown RBP19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 TEX10Q9NXF1 929 aaPredicted RBP19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 HCN3Q9P1Z3 774 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 FCHO1O14526 889 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 ANKRD28O15084 1053 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 CHST10O43529 356 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 ITGAXP20702 1163 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 STX1BP61266 288 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 ABHD18Q0P651 414 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 SYT16Q17RD7 645 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 CA13Q8N1Q1 262 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 TMEM132CQ8N3T6 1108 aa19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 GFM2Q969S9 779 aaKnown RBP19.29■□□□□ 0.68
CDC42SE2-206ENST00000503291 COL26A1Q96A83 441 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms