RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 MATN1P21941 496 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 PCMT1P22061 227 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 MAGEA8P43361 318 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 MVDP53602 400 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 MAPK12P53778 367 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 SLC35A2P78381 396 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 SIM2Q14190 667 aaPredicted RBP11.45□□□□□ -0.58
NUP54-202ENST00000502850 MAD2L1BPQ15013 274 aaPredicted RBP11.45□□□□□ -0.58
NUP54-202ENST00000502850 MOGQ16653 247 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 ZNF829Q3KNS6 432 aaPredicted RBP11.45□□□□□ -0.58
NUP54-202ENST00000502850 IQCCQ4KMZ1 466 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 DEPDC1Q5TB30 811 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 C12orf76Q8N812 135 aaPredicted RBP11.45□□□□□ -0.58
NUP54-202ENST00000502850 HRASLS5Q96KN8 279 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 ZNF300Q96RE9 604 aaPredicted RBP11.45□□□□□ -0.58
NUP54-202ENST00000502850 TIMM29Q9BSF4 260 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 C1QTNF7Q9BXJ2 289 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 TEX101Q9BY14 249 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 WDR26Q9H7D7 661 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 ZNF556Q9HAH1 456 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 C1GALT1Q9NS00 363 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 TAC3Q9UHF0 121 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 FAM32AQ9Y421 112 aaKnown RBP11.45□□□□□ -0.58
NUP54-202ENST00000502850 LYVE1Q9Y5Y7 322 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 TTC28Q96AY4 2481 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 BRWD1Q9NSI6 2320 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 C5orf58C9J3I9 102 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 PTGES3LE9PB15 166 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 CACNB4O00305 520 aaPredicted RBP11.44□□□□□ -0.58
NUP54-202ENST00000502850 SAP18O00422 153 aaKnown RBP11.44□□□□□ -0.58
NUP54-202ENST00000502850 PLK4O00444 970 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 SLC22A1O15245 554 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 PDPK1O15530 556 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 FAM20BO75063 409 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 CYP4B1P13584 511 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 AGXTP21549 392 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 AQP1P29972 269 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 GJA4P35212 333 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 OPRD1P41143 372 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 ST13P50502 369 aaKnown RBP11.44□□□□□ -0.58
NUP54-202ENST00000502850 DSTNP60981 165 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 MEF2AQ02078 507 aaPredicted RBP11.44□□□□□ -0.58
NUP54-202ENST00000502850 KCNC4Q03721 635 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 MESP2Q0VG99 397 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 CST6Q15828 149 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 FGD3Q5JSP0 725 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 ANKRD34AQ69YU3 496 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 LAIR2Q6ISS4 152 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 PRSS48Q7RTY5 328 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 B3GNT8Q7Z7M8 397 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 GALNT10Q86SR1 603 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 P3H2Q8IVL5 708 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 TBC1D19Q8N5T2 526 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 OR10G2Q8NGC3 310 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 NFKBIDQ8NI38 313 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 CNIH3Q8TBE1 160 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 RASSF5Q8WWW0 418 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 MAL2Q969L2 176 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 CIDECQ96AQ7 238 aaPredicted RBP11.44□□□□□ -0.58
NUP54-202ENST00000502850 MRPL38Q96DV4 380 aaKnown RBP11.44□□□□□ -0.58
NUP54-202ENST00000502850 NEURL3Q96EH8 262 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 RSPH9Q9H1X1 276 aaPredicted RBP11.44□□□□□ -0.58
NUP54-202ENST00000502850 SPNS1Q9H2V7 528 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 NDUFAF4Q9P032 175 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 TMEM98Q9Y2Y6 226 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 NCOR1O75376 2440 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 MYO7AQ13402 2215 aa11.44□□□□□ -0.58
NUP54-202ENST00000502850 ATG2AQ2TAZ0 1938 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 TMEM247A6NEH6 219 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 OTOL1A6NHN0 477 aaPredicted RBP11.43□□□□□ -0.58
NUP54-202ENST00000502850 E9PQ18 207 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 DIRAS1O95057 198 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 GABARAPO95166 117 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 PCDH8O95206 1070 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 FCARP24071 287 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 TPP2P29144 1249 aaPredicted RBP11.43□□□□□ -0.58
NUP54-202ENST00000502850 SERPINB10P48595 397 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 ARFIP1P53367 373 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 CRYBA2P53672 197 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 EMP3P54852 163 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 PCBP3P57721 371 aaKnown RBP11.43□□□□□ -0.58
NUP54-202ENST00000502850 SPIBQ01892 262 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 EEF1A2Q05639 463 aaKnown RBP11.43□□□□□ -0.58
NUP54-202ENST00000502850 ENPP2Q13822 863 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 C16orf72Q14CZ0 275 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 NPTX1Q15818 432 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 SLC5A12Q1EHB4 618 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 AGBL4Q5VU57 503 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 REEP3Q6NUK4 255 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 VN1R5Q7Z5H4 357 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 ADGRD2Q7Z7M1 963 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 RNF130Q86XS8 419 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 PLA2G15Q8NCC3 412 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 ZNF540Q8NDQ6 660 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 TBC1D15Q8TC07 691 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 MIPOL1Q8TD10 442 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 RGMAQ96B86 450 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 PPP1R14BQ96C90 147 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 ZBED6CLQ96FA7 236 aaPredicted RBP11.43□□□□□ -0.58
NUP54-202ENST00000502850 IL17FQ96PD4 163 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms