RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 SKILP12757 684 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 CYP3A5P20815 502 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 C4BPBP20851 252 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 ACKR3P25106 362 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 IRX4P78413 519 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 GIT2Q14161 759 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 MTHFSDQ2M296 383 aaKnown RBP3.47□□□□□ -1.85
SMC4-225ENST00000497203 KRTAP27-1Q3LI81 207 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 CCDC92Q53HC0 331 aaPredicted RBP3.47□□□□□ -1.85
SMC4-225ENST00000497203 SPANXN4Q5MJ08 99 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 LYPLAL1Q5VWZ2 237 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 SNRNP48Q6IEG0 339 aaKnown RBP3.47□□□□□ -1.85
SMC4-225ENST00000497203 ADAM5Q6NVV9 412 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 CNSTQ6PJW8 725 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 MIER3Q7Z3K6 550 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 SLC22A15Q8IZD6 547 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 SLC43A2Q8N370 569 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 FBXW8Q8N3Y1 598 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 RNASE8Q8TDE3 154 aaKnown RBP3.47□□□□□ -1.85
SMC4-225ENST00000497203 SLC35C1Q96A29 364 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 ZNF560Q96MR9 790 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 USP28Q96RU2 1077 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 LITAFQ99732 161 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 PAPOLGQ9BWT3 736 aaKnown RBP3.47□□□□□ -1.85
SMC4-225ENST00000497203 TEX13AQ9BXU3 409 aaPredicted RBP3.47□□□□□ -1.85
SMC4-225ENST00000497203 DGCR6LQ9BY27 220 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 WWTR1Q9GZV5 400 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 TNMDQ9H2S6 317 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 C3orf14Q9HBI5 128 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 S100A14Q9HCY8 104 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 PLCXD1Q9NUJ7 323 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 ZNF319Q9P2F9 582 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 UBQLN2Q9UHD9 624 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 TRMT6Q9UJA5 497 aaKnown RBP3.47□□□□□ -1.85
SMC4-225ENST00000497203 MRPS28Q9Y2Q9 187 aaKnown RBP3.47□□□□□ -1.85
SMC4-225ENST00000497203 ANGPTL3Q9Y5C1 460 aa3.47□□□□□ -1.85
SMC4-225ENST00000497203 RNF103O00237 685 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 SLC28A1O00337 649 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 NR5A2O00482 541 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 MLNRO43193 412 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 MTRF1O75570 445 aaKnown RBP3.46□□□□□ -1.86
SMC4-225ENST00000497203 BCAS2O75934 225 aaPredicted RBP3.46□□□□□ -1.86
SMC4-225ENST00000497203 FGF19O95750 216 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 SFTPBP07988 381 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 SERPINF2P08697 491 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 ODC1P11926 461 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 AREGP15514 252 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 UGT1A6P19224 532 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 IL10P22301 178 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 GPR183P32249 361 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 MMP12P39900 470 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 TNFSF10P50591 281 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 CCR4P51679 360 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 GALK2Q01415 458 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 PPP1R8Q12972 351 aaKnown RBP3.46□□□□□ -1.86
SMC4-225ENST00000497203 SPHARQ15513 63 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 STX1AQ16623 288 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 ZFP69Q49AA0 526 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 BSPRYQ5W0U4 402 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 BHLHB9Q6PI77 547 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 TMEM64Q6YI46 380 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 Q6ZVQ6 151 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 NLRP14Q86W24 1093 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 ZNF248Q8NDW4 579 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 TRPV3Q8NET8 790 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 SLCO4A1Q96BD0 722 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 ZNF274Q96GC6 653 aaPredicted RBP3.46□□□□□ -1.86
SMC4-225ENST00000497203 PRAM1Q96QH2 718 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 ZNF300Q96RE9 604 aaPredicted RBP3.46□□□□□ -1.86
SMC4-225ENST00000497203 S1PR3Q99500 378 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 SYT15Q9BQS2 421 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 GPN1Q9HCN4 374 aaPredicted RBP3.46□□□□□ -1.86
SMC4-225ENST00000497203 ACOXLQ9NUZ1 547 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 PLEK2Q9NYT0 353 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 PSORS1C1Q9UIG5 152 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 PILRAQ9UKJ1 303 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 ODF2LQ9ULJ1 636 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 PLCL2Q9UPR0 1127 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 SH3GLB1Q9Y371 365 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 PYGO1Q9Y3Y4 419 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 TEX264Q9Y6I9 313 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 CSNK1G3Q9Y6M4 447 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 ZHX2Q9Y6X8 837 aa3.46□□□□□ -1.86
SMC4-225ENST00000497203 RNF103-CHMP3A0A140T963 221 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 ATP6AP2A0A1C7CYW4 349 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 RTCAO00442 366 aaKnown RBP3.45□□□□□ -1.86
SMC4-225ENST00000497203 NTN3O00634 580 aaPredicted RBP3.45□□□□□ -1.86
SMC4-225ENST00000497203 P2RX6O15547 441 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 SEC22BO75396 215 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 GMNNO75496 209 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 EPOP01588 193 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 CHRNGP07510 517 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 CT45A8P0DMV1 189 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 CT45A9P0DMV2 189 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 ZNF26P17031 533 aaPredicted RBP3.45□□□□□ -1.86
SMC4-225ENST00000497203 OPRL1P41146 370 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 ALDH3B1P43353 468 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 NSFP46459 744 aaKnown RBP3.45□□□□□ -1.86
SMC4-225ENST00000497203 SLC6A12P48065 614 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 CASP9P55211 416 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms