RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 CEACAM20Q6UY09 585 aa17.31■□□□□ 0.36
RGP1-202ENST00000496906 NMUR2Q9GZQ4 415 aa17.31■□□□□ 0.36
RGP1-202ENST00000496906 BAIAP2L1Q9UHR4 511 aa17.31■□□□□ 0.36
RGP1-202ENST00000496906 SATB2Q9UPW6 733 aa17.31■□□□□ 0.36
RGP1-202ENST00000496906 B3GALT1Q9Y5Z6 326 aa17.31■□□□□ 0.36
RGP1-202ENST00000496906 COPG1Q9Y678 874 aaKnown RBP17.31■□□□□ 0.36
RGP1-202ENST00000496906 H0YIG0 161 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 RDH16O75452 317 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 HBQ1P09105 142 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 ALAS2P22557 587 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 AVPR1BP47901 424 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 MRPL19P49406 292 aaKnown RBP17.3■□□□□ 0.36
RGP1-202ENST00000496906 ATP4BP51164 291 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 SLAMF1Q13291 335 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 SLC9A5Q14940 896 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 DCAF12Q5T6F0 453 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 CLNKQ7Z7G1 428 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 MARCH9Q86YJ5 346 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 METTL27Q8N6F8 245 aaPredicted RBP17.3■□□□□ 0.36
RGP1-202ENST00000496906 SLC38A9Q8NBW4 561 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.3■□□□□ 0.36
RGP1-202ENST00000496906 EGLN2Q96KS0 407 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 TSSK3Q96PN8 268 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 TAAR9Q96RI9 348 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 ZPBPQ9BS86 351 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 DDA1Q9BW61 102 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 NPLQ9BXD5 320 aaPredicted RBP17.3■□□□□ 0.36
RGP1-202ENST00000496906 SLC7A5P2Q9GIP4 190 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 SAR1AQ9NR31 198 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 SDR39U1Q9NRG7 319 aaPredicted RBP17.3■□□□□ 0.36
RGP1-202ENST00000496906 TXLNGQ9NUQ3 528 aa17.3■□□□□ 0.36
RGP1-202ENST00000496906 TMEM184BQ9Y519 407 aaPredicted RBP17.3■□□□□ 0.36
RGP1-202ENST00000496906 ANKRD28O15084 1053 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 CPNE3O75131 537 aaKnown RBP17.29■□□□□ 0.36
RGP1-202ENST00000496906 DNAJB6O75190 326 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 NTRK1P04629 796 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 FAM58BPP0C7Q3 252 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 GSTM5P46439 218 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 HNRNPH2P55795 449 aaKnown RBP17.29■□□□□ 0.36
RGP1-202ENST00000496906 TRA2BP62995 288 aaKnown RBP17.29■□□□□ 0.36
RGP1-202ENST00000496906 OLR1P78380 273 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 IRX1P78414 480 aaPredicted RBP17.29■□□□□ 0.36
RGP1-202ENST00000496906 RUNX2Q13950 521 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 SQLEQ14534 574 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 PDCD4Q53EL6 469 aaKnown RBP17.29■□□□□ 0.36
RGP1-202ENST00000496906 PRMT9Q6P2P2 845 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 FOXR1Q6PIV2 292 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 RIPOR1Q6ZS17 1223 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 MTDHQ86UE4 582 aaKnown RBP17.29■□□□□ 0.36
RGP1-202ENST00000496906 OR5T3Q8NGG3 340 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 CLHC1Q8NHS4 586 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 C16orf78Q8WTQ4 265 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 RNF31Q96EP0 1072 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 MMABQ96EY8 250 aaPredicted RBP17.29■□□□□ 0.36
RGP1-202ENST00000496906 GBP5Q96PP8 586 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 ACTL8Q9H568 366 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 MYNNQ9NPC7 610 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 LYARQ9NX58 379 aaKnown RBP17.29■□□□□ 0.36
RGP1-202ENST00000496906 NDOR1Q9UHB4 597 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 DAPP1Q9UN19 280 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 ASB4Q9Y574 426 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 PCDHGA3Q9Y5H0 932 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 WDFY3Q8IZQ1 3526 aa17.29■□□□□ 0.36
RGP1-202ENST00000496906 SCN3AQ9NY46 2000 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 FCHO1O14526 889 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 CCDC22O60826 627 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 ZNF28P17035 718 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 ITGAXP20702 1163 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 LIM2P55344 173 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 TAS2R50P59544 299 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 STX1BP61266 288 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 PUM1Q14671 1186 aaKnown RBP eCLIP17.28■□□□□ 0.36
RGP1-202ENST00000496906 CA13Q8N1Q1 262 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 CPSF7Q8N684 471 aaKnown RBP17.28■□□□□ 0.36
RGP1-202ENST00000496906 PROKR1Q8TCW9 393 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 TM4SF18Q96CE8 201 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 CLIP3Q96DZ5 547 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 SLC45A3Q96JT2 553 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 MAPKAP1Q9BPZ7 522 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 ASPSCR1Q9BZE9 553 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 MYLK2Q9H1R3 596 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 CLK4Q9HAZ1 481 aaKnown RBP17.28■□□□□ 0.36
RGP1-202ENST00000496906 LYRM4Q9HD34 91 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 TEX10Q9NXF1 929 aaPredicted RBP17.28■□□□□ 0.36
RGP1-202ENST00000496906 KCMF1Q9P0J7 381 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 FBXW2Q9UKT8 454 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 CDC14AQ9UNH5 594 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 PCDHGA8Q9Y5G5 932 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 DCTN3O75935 186 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 KIAA0754O94854 1291 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 IL3P08700 152 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 PCSK2P16519 638 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 RORAP35398 523 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 ASMTP46597 345 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 NME5P56597 212 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 CLDN8P56748 225 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 UBAP2LQ14157 1087 aaKnown RBP17.28■□□□□ 0.36
RGP1-202ENST00000496906 RPS6KA2Q15349 733 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 C1orf189Q5VU69 101 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 ZNF385CQ66K41 422 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms