RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 KIAA1161Q6NSJ0 714 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 TMEM184AQ6ZMB5 413 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 SLC30A8Q8IWU4 369 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 ADGRF3Q8IZF5 1079 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 NATD1Q8N6N6 113 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 LINC01555Q8NAE3 123 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 KLK6Q92876 244 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 TAMM41Q96BW9 452 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 PRAP1Q96NZ9 151 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 INSM2Q96T92 566 aaPredicted RBP12.45□□□□□ -0.42
GARNL3-220ENST00000496711 DCUN1D5Q9BTE7 237 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 RAB11FIP5Q9BXF6 653 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 NLNQ9BYT8 704 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 NAA50Q9GZZ1 169 aaKnown RBP12.45□□□□□ -0.42
GARNL3-220ENST00000496711 LHPPQ9H008 270 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 RMI1Q9H9A7 625 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 PCDHGB3Q9Y5G1 929 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 SNRNP200O75643 2136 aaKnown RBP12.45□□□□□ -0.42
GARNL3-220ENST00000496711 PRR23AA6NEV1 266 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 PDPK1O15530 556 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 PLRG1O43660 514 aaKnown RBP12.44□□□□□ -0.42
GARNL3-220ENST00000496711 IFNA14P01570 189 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 CDK4P11802 303 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 TIE1P35590 1138 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 TNFRSF4P43489 277 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 KIR2DL1P43626 348 aaPredicted RBP12.44□□□□□ -0.42
GARNL3-220ENST00000496711 GSTM5P46439 218 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 TMBIM6P55061 237 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 DSTNP60981 165 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 SGCGQ13326 291 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 HEPACAMQ14CZ8 416 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 MLF2Q15773 248 aaPredicted RBP12.44□□□□□ -0.42
GARNL3-220ENST00000496711 CRB2Q5IJ48 1285 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 KIAA1614Q5VZ46 1190 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 BPIFB6Q8NFQ5 453 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 GANCQ8TET4 914 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 TM4SF18Q96CE8 201 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 NODALQ96S42 347 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 ZNF347Q96SE7 839 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 PITX2Q99697 317 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 TRMT61BQ9BVS5 477 aaKnown RBP12.44□□□□□ -0.42
GARNL3-220ENST00000496711 C1QTNF2Q9BXJ5 285 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 TMEM121BQ9BXQ6 578 aaPredicted RBP12.44□□□□□ -0.42
GARNL3-220ENST00000496711 EPS8L2Q9H6S3 715 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 CXorf36Q9H7Y0 433 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 THSD1Q9NS62 852 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 IMP3Q9NV31 184 aaKnown RBP12.44□□□□□ -0.42
GARNL3-220ENST00000496711 PAK1IP1Q9NWT1 392 aaPredicted RBP12.44□□□□□ -0.42
GARNL3-220ENST00000496711 FBXL12Q9NXK8 326 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 NDUFAF4Q9P032 175 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 NDRG4Q9ULP0 352 aaKnown RBP12.44□□□□□ -0.42
GARNL3-220ENST00000496711 LYVE1Q9Y5Y7 322 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 C5orf42Q9H799 3197 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 MYO10Q9HD67 2058 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 A0A1W2PQU0 124 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 TRIM64BA6NI03 449 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 K7EQS6 105 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 M0QX08 132 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 OR1F1O43749 312 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 FUCA1P04066 466 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 LAMP2P13473 410 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 MATN1P21941 496 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 PKLRP30613 574 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 IGFALSP35858 605 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 ALDH9A1P49189 494 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 RAB28P51157 221 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 GALK1P51570 392 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 CSNK1G2P78368 415 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 GTF2IRD2BQ6EKJ0 949 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 TSEN54Q7Z6J9 526 aaKnown RBP12.44□□□□□ -0.42
GARNL3-220ENST00000496711 B3GNT8Q7Z7M8 397 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 GTF2IRD2Q86UP8 949 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 FAM124AQ86V42 546 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 ZC3H7AQ8IWR0 971 aaKnown RBP12.44□□□□□ -0.42
GARNL3-220ENST00000496711 DNAJC5GQ8N7S2 189 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 OR5P2Q8WZ92 322 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 MUL1Q969V5 352 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 RGMAQ96B86 450 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 ZNF764Q96H86 408 aaPredicted RBP12.44□□□□□ -0.42
GARNL3-220ENST00000496711 CAMK1GQ96NX5 476 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 MYOCQ99972 504 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 C1QTNF7Q9BXJ2 289 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 GABARAPL3Q9BY60 117 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 NEUROD4Q9HD90 331 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 LHX9Q9NQ69 397 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 ADAM29Q9UKF5 820 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 KCNK6Q9Y257 313 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 SLC17A4Q9Y2C5 497 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.44□□□□□ -0.42
GARNL3-220ENST00000496711 TESMINQ9Y4I5 508 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 SNX8Q9Y5X2 465 aa12.44□□□□□ -0.42
GARNL3-220ENST00000496711 CDH23Q9H251 3354 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 TNFRSF11BO00300 401 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 LATO43561 262 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 XPNPEP2O43895 674 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 DNAJB5O75953 348 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 CEACAM5P06731 702 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 ITGA2P17301 1181 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 JUNDP17535 347 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 ITIH1P19827 911 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms