RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 PHF21BQ96EK2 531 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 ZNF354BQ96LW1 612 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 F2RL3Q96RI0 385 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 MS4A8Q9BY19 250 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 AICDAQ9GZX7 198 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 IPPKQ9H8X2 491 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 MMP25Q9NPA2 562 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 AGPAT4Q9NRZ5 378 aa16.58■□□□□ 0.24
HDAC4-211ENST00000494800 PSMC3IPQ9P2W1 217 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-211ENST00000494800 COPG1Q9Y678 874 aaKnown RBP16.58■□□□□ 0.24
HDAC4-211ENST00000494800 CELA2AP08217 269 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 TAC1P20366 129 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 MAOAP21397 527 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 EEF1DP29692 281 aaKnown RBP16.57■□□□□ 0.24
HDAC4-211ENST00000494800 PIK3CBP42338 1070 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 RAP1GDS1P52306 607 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 HSD17B7P56937 341 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 SLC13A2Q13183 592 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 DDX39BQ13838 428 aaKnown RBP16.57■□□□□ 0.24
HDAC4-211ENST00000494800 AP5B1Q2VPB7 878 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 ADNP2Q6IQ32 1131 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 TIFABQ6ZNK6 161 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 GOLGA7Q7Z5G4 137 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 CUZD1Q86UP6 607 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 ZNF595Q8IYB9 648 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 CISD2Q8N5K1 135 aaKnown RBP16.57■□□□□ 0.24
HDAC4-211ENST00000494800 SLC5A8Q8N695 610 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 HAS2Q92819 552 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 QRFPRQ96P65 431 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 RNF32Q9H0A6 362 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.57■□□□□ 0.24
HDAC4-211ENST00000494800 PRTFDC1Q9NRG1 225 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 ZNF358Q9NW07 568 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 STMN3Q9NZ72 180 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 TSC22D4Q9Y3Q8 395 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 PCDHGA10Q9Y5H3 936 aa16.57■□□□□ 0.24
HDAC4-211ENST00000494800 TRAV17A0A0B4J275 112 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 TCRBV16S1A1N1A0A5B0 115 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 FAM227AF5H4B4 570 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 H0YIV9 168 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 E2F3O00716 465 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 SIX3O95343 332 aaPredicted RBP16.56■□□□□ 0.24
HDAC4-211ENST00000494800 CLDN9O95484 217 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 TGFB1P01137 390 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 CERS1P27544 350 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 SSR2P43308 183 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 TSFMP43897 325 aaKnown RBP16.56■□□□□ 0.24
HDAC4-211ENST00000494800 CCNG1P51959 295 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 LIM2P55344 173 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 SLC26A5P58743 744 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 BTG2P78543 158 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 RUNX2Q13950 521 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 KHDRBS2Q5VWX1 349 aaKnown RBP16.56■□□□□ 0.24
HDAC4-211ENST00000494800 C7orf57Q8NEG2 295 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 HUS1BQ8NHY5 278 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 UBLCP1Q8WVY7 318 aaPredicted RBP16.56■□□□□ 0.24
HDAC4-211ENST00000494800 SNRNP40Q96DI7 357 aaKnown RBP16.56■□□□□ 0.24
HDAC4-211ENST00000494800 TXLNGYQ9BZA5 131 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 PPCSQ9HAB8 311 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 LYRM4Q9HD34 91 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 DAPP1Q9UN19 280 aa16.56■□□□□ 0.24
HDAC4-211ENST00000494800 SCN3AQ9NY46 2000 aa16.55■□□□□ 0.24
HDAC4-211ENST00000494800 BLACEA4D250 179 aa16.55■□□□□ 0.24
HDAC4-211ENST00000494800 TBX6O95947 436 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-211ENST00000494800 PTX3P26022 381 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-211ENST00000494800 TNFRSF8P28908 595 aa16.55■□□□□ 0.24
HDAC4-211ENST00000494800 CPSF6Q16630 551 aaKnown RBP eCLIP16.55■□□□□ 0.24
HDAC4-211ENST00000494800 MEP1AQ16819 746 aa16.55■□□□□ 0.24
HDAC4-211ENST00000494800 PRR30Q53SZ7 412 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-211ENST00000494800 C10orf62Q5T681 223 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-211ENST00000494800 GSPT2Q8IYD1 628 aaKnown RBP16.55■□□□□ 0.24
HDAC4-211ENST00000494800 L3MBTL4Q8NA19 623 aa16.55■□□□□ 0.24
HDAC4-211ENST00000494800 FAM47BQ8NA70 645 aa16.55■□□□□ 0.24
HDAC4-211ENST00000494800 LRRN4CLQ8ND94 238 aa16.55■□□□□ 0.24
HDAC4-211ENST00000494800 OR1N1Q8NGS0 311 aa16.55■□□□□ 0.24
HDAC4-211ENST00000494800 ACMSDQ8TDX5 336 aa16.55■□□□□ 0.24
HDAC4-211ENST00000494800 RGMAQ96B86 450 aa16.55■□□□□ 0.24
HDAC4-211ENST00000494800 MTERF1Q99551 399 aaKnown RBP16.55■□□□□ 0.24
HDAC4-211ENST00000494800 NOL11Q9H8H0 719 aaKnown RBP16.55■□□□□ 0.24
HDAC4-211ENST00000494800 PRDM7Q9NQW5 492 aa16.55■□□□□ 0.24
HDAC4-211ENST00000494800 PLA2G3Q9NZ20 509 aa16.55■□□□□ 0.24
HDAC4-211ENST00000494800 CSAG2Q9Y5P2 127 aa16.55■□□□□ 0.24
HDAC4-211ENST00000494800 TENM4Q6N022 2769 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 IGKV3D-11A0A0A0MRZ8 115 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 OR5H15A6NDH6 313 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 LRRC14BA6NHZ5 514 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 SAGE2PA6NJ88 616 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 ZIC2O95409 532 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-211ENST00000494800 WDPCPO95876 746 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 HIST1H1TP22492 207 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-211ENST00000494800 ATP5A1P25705 553 aaKnown RBP16.54■□□□□ 0.24
HDAC4-211ENST00000494800 GCAP28676 217 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 TNFSF10P50591 281 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 ARFIP1P53367 373 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 ELOAQ14241 798 aaKnown RBP16.54■□□□□ 0.24
HDAC4-211ENST00000494800 TERF2Q15554 542 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 ACER2Q5QJU3 275 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 DEPDC1Q5TB30 811 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 TTC19Q6DKK2 380 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-211ENST00000494800 OR4C11Q6IEV9 310 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms