RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 SP1P08047 785 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 SLC35E2BP0CK96 405 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 NME2P22392 152 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 GGT5P36269 586 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 RFC3P40938 356 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 PAFAH1B1P43034 410 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 GPR143P51810 404 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 PLA2G16P53816 162 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 TAS2R50P59544 299 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 SKP1P63208 163 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 DOC2AQ14183 400 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 NIPAL1Q6NVV3 410 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 ZNF793Q6ZN11 406 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 UBE3DQ7Z6J8 389 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 CLNKQ7Z7G1 428 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 GPSM1Q86YR5 675 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 ARMC10Q8N2F6 343 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 RNF175Q8N4F7 328 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 PDPRQ8NCN5 879 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 B3GNT7Q8NFL0 401 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 CPNE1Q99829 537 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 TRIM45Q9H8W5 580 aaPredicted RBP10.87□□□□□ -0.67
VTI1A-208ENST00000494728 DNAJC11Q9NVH1 559 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 NSMCE4AQ9NXX6 385 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 NPIPA1Q9UND3 350 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 ENTPD4Q9Y227 616 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 ZNF835Q9Y2P0 537 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 SPG11Q96JI7 2443 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 A0A0G2JMM0 328 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 A0A1W2PPB8 328 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 A0A1W2PRS3 328 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 FAM187AA6NFU0 413 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 TMEM200CA6NKL6 621 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 KIR3DP1A8MWS1 328 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 PSMD12O00232 456 aaPredicted RBP10.86□□□□□ -0.67
VTI1A-208ENST00000494728 RTCAO00442 366 aaKnown RBP10.86□□□□□ -0.67
VTI1A-208ENST00000494728 CLEC3AO75596 197 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 CD46P15529 392 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 TRHRP34981 398 aaPredicted RBP10.86□□□□□ -0.67
VTI1A-208ENST00000494728 PTGER1P34995 402 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 GP5P40197 560 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 RAB38P57729 211 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 STXBP1P61764 594 aaKnown RBP10.86□□□□□ -0.67
VTI1A-208ENST00000494728 ALDH6A1Q02252 535 aaKnown RBP10.86□□□□□ -0.67
VTI1A-208ENST00000494728 MAPKAPK3Q16644 382 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 KBTBD12Q3ZCT8 623 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 SLC25A25Q6KCM7 469 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 ABHD17CQ6PCB6 329 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 MDGA2Q7Z553 956 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 MRGPRGQ86SM5 289 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 ZNF321PQ8N8H1 164 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 SNX31Q8N9S9 440 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 TMEM178AQ8NBL3 297 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 OR2L5Q8NG80 312 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 FBXO25Q8TCJ0 367 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 NCLNQ969V3 563 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 WDR34Q96EX3 536 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 F2RL3Q96RI0 385 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 REXO4Q9GZR2 422 aaKnown RBP10.86□□□□□ -0.67
VTI1A-208ENST00000494728 ALG9Q9H6U8 611 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 LIN28AQ9H9Z2 209 aaKnown RBP10.86□□□□□ -0.67
VTI1A-208ENST00000494728 CLK4Q9HAZ1 481 aaKnown RBP10.86□□□□□ -0.67
VTI1A-208ENST00000494728 PNO1Q9NRX1 252 aaKnown RBP10.86□□□□□ -0.67
VTI1A-208ENST00000494728 GPRC5BQ9NZH0 403 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 CD274Q9NZQ7 290 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 PTBP2Q9UKA9 531 aaKnown RBP10.86□□□□□ -0.67
VTI1A-208ENST00000494728 MMACHCQ9Y4U1 282 aa10.86□□□□□ -0.67
VTI1A-208ENST00000494728 MTORP42345 2549 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 ESYT3A0FGR9 886 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 URADA6NGE7 173 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 C19orf84I3L1E1 186 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 CYR61O00622 381 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 EIF3HO15372 352 aaKnown RBP eCLIP10.85□□□□□ -0.67
VTI1A-208ENST00000494728 SH3BGRLO75368 114 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 STK16O75716 305 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 STMN1P16949 149 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 HLCSP50747 726 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 SLC12A2P55011 1212 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 PLTPP55058 493 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 LIM2P55344 173 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 RAB10P61026 200 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 IRF9Q00978 393 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 CALCOCO2Q13137 446 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 E2F2Q14209 437 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 SLMAPQ14BN4 828 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 TERF2Q15554 542 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 PDK4Q16654 411 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 XKR6Q5GH73 641 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 SP5Q6BEB4 398 aaPredicted RBP10.85□□□□□ -0.67
VTI1A-208ENST00000494728 C3P1Q6ZMU1 363 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 Q6ZPB1 254 aaPredicted RBP10.85□□□□□ -0.67
VTI1A-208ENST00000494728 C3orf62Q6ZUJ4 267 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 CCDC25Q86WR0 208 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 CTAGE3PQ8IX95 158 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 PPM1NQ8N819 430 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 ADAMTS18Q8TE60 1221 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 FBF1Q8TES7 1133 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 KIAA1191Q96A73 305 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 FAR2Q96K12 515 aa10.85□□□□□ -0.67
VTI1A-208ENST00000494728 PHF12Q96QT6 1004 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms