RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 ZNF227Q86WZ6 799 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 KRT78Q8N1N4 520 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 TCAIMQ8N3R3 496 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 FAM47BQ8NA70 645 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 PDPRQ8NCN5 879 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 SUN3Q8TAQ9 357 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 KCTD4Q8WVF5 259 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 SREK1Q8WXA9 508 aaKnown RBP7.99□□□□□ -1.13
LRCH3-219ENST00000494069 GAL3ST3Q96A11 431 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 WDR34Q96EX3 536 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 C16orf45Q96MC5 204 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-219ENST00000494069 ATOH8Q96SQ7 321 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 CSF3RQ99062 836 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 CD244Q9BZW8 370 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 TSPAN10Q9H1Z9 355 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-219ENST00000494069 NT5DC2Q9H857 520 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 PRDM9Q9NQV7 894 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 GPRC5BQ9NZH0 403 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 COPG2Q9UBF2 871 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 TEKT2Q9UIF3 430 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 RNF112Q9ULX5 631 aa7.99□□□□□ -1.13
LRCH3-219ENST00000494069 DOPEY1Q5JWR5 2465 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 DIDO1Q9BTC0 2240 aaKnown RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 URADA6NGE7 173 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 ANKDD1BA6NHY2 528 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 SUPT3HB4E1H0 165 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 SAP18O00422 153 aaKnown RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 RTCAO00442 366 aaKnown RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 CYR61O00622 381 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 PRKNO60260 465 aaPredicted RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 SUPT3HO75486 399 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 CLEC3AO75596 197 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 MYO1DO94832 1006 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 S100BP04271 92 aaPredicted RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 C2P06681 752 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 LTA4HP09960 611 aaKnown RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 MTHFD2P13995 350 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 CERS1P27544 350 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 TPP2P29144 1249 aaPredicted RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 STX2P32856 288 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 RAB38P57729 211 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 SKP1P63208 163 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 IRF8Q02556 426 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 CHIT1Q13231 466 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 INAQ16352 499 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 ADPRMQ3LIE5 342 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 CDKL4Q5MAI5 379 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 NIPAL1Q6NVV3 410 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 C8orf74Q6P047 294 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 GFRALQ6UXV0 394 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 ZNF793Q6ZN11 406 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 GALNTL5Q7Z4T8 443 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 RPS19BP1Q86WX3 136 aaKnown RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 SCUBE1Q8IWY4 988 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 CENPLQ8N0S6 344 aaPredicted RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 SLC5A8Q8N695 610 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 NOA1Q8NC60 698 aaKnown RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 STAG3L4Q8TBR4 150 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 THAP3Q8WTV1 239 aaPredicted RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 SCMH1Q96GD3 660 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 FAR2Q96K12 515 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 UTP23Q9BRU9 249 aaKnown RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 SORBS1Q9BX66 1292 aaKnown RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 CAPS2Q9BXY5 557 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 PHACTR1Q9C0D0 580 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 REXO4Q9GZR2 422 aaKnown RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 CNOT10Q9H9A5 744 aaKnown RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 LIN28AQ9H9Z2 209 aaKnown RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 CLK4Q9HAZ1 481 aaKnown RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 PRDM7Q9NQW5 492 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 PRTFDC1Q9NRG1 225 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 PNO1Q9NRX1 252 aaKnown RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 NINJ2Q9NZG7 142 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 ABI3Q9P2A4 366 aa7.98□□□□□ -1.13
LRCH3-219ENST00000494069 DMGDHQ9UI17 866 aaKnown RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 ZNF223Q9UK11 482 aaPredicted RBP7.98□□□□□ -1.13
LRCH3-219ENST00000494069 TRGV8A0A0C4DH27 118 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 TRBV11-1A0A0K0K1C0 115 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 B3GALT2O43825 422 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 KERAO60938 352 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 TGFB1P01137 390 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 CRYABP02511 175 aaKnown RBP7.97□□□□□ -1.13
LRCH3-219ENST00000494069 SP1P08047 785 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 PCNAP12004 261 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 CRABP2P29373 138 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 DCTP40126 519 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 MSH2P43246 934 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 MTTPP55157 894 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 LIM2P55344 173 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 MLF1P58340 268 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 TAS2R50P59544 299 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 ID2Q02363 134 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 CKAP4Q07065 602 aaKnown RBP7.97□□□□□ -1.13
LRCH3-219ENST00000494069 ILF2Q12905 390 aaKnown RBP7.97□□□□□ -1.13
LRCH3-219ENST00000494069 SLC13A2Q13183 592 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 E2F2Q14209 437 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 UAP1Q16222 522 aaPredicted RBP7.97□□□□□ -1.13
LRCH3-219ENST00000494069 MAPKAPK3Q16644 382 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 RNFT1Q5M7Z0 435 aa7.97□□□□□ -1.13
LRCH3-219ENST00000494069 FAM219BQ5XKK7 198 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms