RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 IRF9Q00978 393 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 CHIT1Q13231 466 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 BMPR2Q13873 1038 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 E2F2Q14209 437 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 SLMAPQ14BN4 828 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 ZRSR2Q15696 482 aaKnown RBP9.12□□□□□ -0.95
UFD1-210ENST00000494054 PDK4Q16654 411 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 SLC25A25Q6KCM7 469 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 RAPH1Q70E73 1250 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 GALNTL5Q7Z4T8 443 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 UBE3DQ7Z6J8 389 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 SCUBE1Q8IWY4 988 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 CENPLQ8N0S6 344 aaPredicted RBP9.12□□□□□ -0.95
UFD1-210ENST00000494054 LGI4Q8N135 537 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 FAM47BQ8NA70 645 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 APCDD1LQ8NCL9 501 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 B3GNT7Q8NFL0 401 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 OR2L5Q8NG80 312 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 STAG3L4Q8TBR4 150 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 NXNL1Q96CM4 212 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 PTCD3Q96EY7 689 aaKnown RBP9.12□□□□□ -0.95
UFD1-210ENST00000494054 SEC16BQ96JE7 1060 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 ATOH8Q96SQ7 321 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 CSF3RQ99062 836 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 DEFB126Q9BYW3 111 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 PITHD1Q9GZP4 211 aaPredicted RBP9.12□□□□□ -0.95
UFD1-210ENST00000494054 REXO4Q9GZR2 422 aaKnown RBP9.12□□□□□ -0.95
UFD1-210ENST00000494054 TSPAN10Q9H1Z9 355 aaPredicted RBP9.12□□□□□ -0.95
UFD1-210ENST00000494054 NMRAL1Q9HBL8 299 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 PRDM7Q9NQW5 492 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 PRTFDC1Q9NRG1 225 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 LRFN1Q9P244 771 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 ZNF223Q9UK11 482 aaPredicted RBP9.12□□□□□ -0.95
UFD1-210ENST00000494054 MMACHCQ9Y4U1 282 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 TEX15Q9BXT5 2789 aa9.12□□□□□ -0.95
UFD1-210ENST00000494054 CENPEQ02224 2701 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 TRGV8A0A0C4DH27 118 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 MYOCOSA0A1B0GUC4 107 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 ASPDHA6ND91 283 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 SUPT3HB4E1H0 165 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 RTCAO00442 366 aaKnown RBP9.11□□□□□ -0.95
UFD1-210ENST00000494054 CYR61O00622 381 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 ZNHIT1O43257 154 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 PRKNO60260 465 aaPredicted RBP9.11□□□□□ -0.95
UFD1-210ENST00000494054 SH3BGRLO75368 114 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 SUPT3HO75486 399 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 MYO1DO94832 1006 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 S100BP04271 92 aaPredicted RBP9.11□□□□□ -0.95
UFD1-210ENST00000494054 C2P06681 752 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 MTHFD2P13995 350 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 CD46P15529 392 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 CRABP2P29373 138 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 EEF1DP29692 281 aaKnown RBP9.11□□□□□ -0.95
UFD1-210ENST00000494054 STX2P32856 288 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 TRHRP34981 398 aaPredicted RBP9.11□□□□□ -0.95
UFD1-210ENST00000494054 CASP2P42575 452 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 GPR143P51810 404 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 MTTPP55157 894 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 PER3P56645 1201 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 HSD17B7P56937 341 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 IRF8Q02556 426 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 SLC13A2Q13183 592 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 NAB1Q13506 487 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 TBCCQ15814 346 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 RNFT1Q5M7Z0 435 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 MROH9Q5TGP6 573 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 TRIM40Q6P9F5 258 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 ZNF793Q6ZN11 406 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 LRRC70Q7Z2Q7 622 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.11□□□□□ -0.95
UFD1-210ENST00000494054 CLNKQ7Z7G1 428 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 TBC1D1Q86TI0 1168 aaPredicted RBP9.11□□□□□ -0.95
UFD1-210ENST00000494054 SIAH3Q8IW03 269 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 ARMC10Q8N2F6 343 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 RNF175Q8N4F7 328 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 ARMC2Q8NEN0 867 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 ZNF473Q8WTR7 871 aaKnown RBP9.11□□□□□ -0.95
UFD1-210ENST00000494054 THAP3Q8WTV1 239 aaPredicted RBP9.11□□□□□ -0.95
UFD1-210ENST00000494054 KCTD4Q8WVF5 259 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 FRMD6Q96NE9 622 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 SERINC2Q96SA4 455 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 EFCAB11Q9BUY7 163 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 TRIM45Q9H8W5 580 aaPredicted RBP9.11□□□□□ -0.95
UFD1-210ENST00000494054 PNO1Q9NRX1 252 aaKnown RBP9.11□□□□□ -0.95
UFD1-210ENST00000494054 NUDT4Q9NZJ9 180 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 KCMF1Q9P0J7 381 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 SH3BGRL2Q9UJC5 107 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 DAPP1Q9UN19 280 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 ACOT9Q9Y305 439 aa9.11□□□□□ -0.95
UFD1-210ENST00000494054 MYO7BQ6PIF6 2116 aa9.1□□□□□ -0.95
UFD1-210ENST00000494054 TRBV11-1A0A0K0K1C0 115 aa9.1□□□□□ -0.95
UFD1-210ENST00000494054 LRRC14BA6NHZ5 514 aa9.1□□□□□ -0.95
UFD1-210ENST00000494054 NPIPA5E9PKD4 350 aa9.1□□□□□ -0.95
UFD1-210ENST00000494054 K7EPI3 171 aa9.1□□□□□ -0.95
UFD1-210ENST00000494054 CLDN4O14493 209 aa9.1□□□□□ -0.95
UFD1-210ENST00000494054 NME2P1O60361 137 aa9.1□□□□□ -0.95
UFD1-210ENST00000494054 CTNSO60931 367 aa9.1□□□□□ -0.95
UFD1-210ENST00000494054 KERAO60938 352 aa9.1□□□□□ -0.95
UFD1-210ENST00000494054 SLC25A12O75746 678 aa9.1□□□□□ -0.95
UFD1-210ENST00000494054 TGFB1P01137 390 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms