RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ATP5F1P24539 256 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 CERS1P27544 350 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 SSR2P43308 183 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 CCT5P48643 541 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 MTTPP55157 894 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 ACTN3Q08043 901 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 ABRAXAS2Q15018 415 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 ZRSR2Q15696 482 aaKnown RBP9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 NSDHLQ15738 373 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 SGO1Q5FBB7 561 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 CRYBG3Q68DQ2 2970 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 METTL2BQ6P1Q9 378 aaKnown RBP9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 LANCL3Q6ZV70 420 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 CHSY3Q70JA7 882 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 SLC22A9Q8IVM8 553 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 LAS2Q8IYD9 372 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 GALNT16Q8N428 558 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 RIBC1Q8N443 379 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 CCNYL1Q8N7R7 359 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 TEX19Q8NA77 164 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 SRFBP1Q8NEF9 429 aaKnown RBP9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 OR52B6Q8NGF0 335 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 HUS1BQ8NHY5 278 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 TRPC4APQ8TEL6 797 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 ZNF473Q8WTR7 871 aaKnown RBP9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 TBC1D20Q96BZ9 403 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 CMTM7Q96FZ5 175 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 THOC3Q96J01 351 aaKnown RBP9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 SEC16BQ96JE7 1060 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 OR1F2PQ96R84 312 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 NUDT9Q9BW91 350 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 MS4A8Q9BY19 250 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 AICDAQ9GZX7 198 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 OR51B5Q9H339 312 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 COPG2Q9UBF2 871 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 ADGRE2Q9UHX3 823 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 GRID1Q9ULK0 1009 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 ZNF451Q9Y4E5 1061 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 PCSK5Q92824 1860 aa9.81□□□□□ -0.84
TRAPPC12-222ENST00000493792 MED13Q9UHV7 2174 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 A1L4Q6 167 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 FAM227AF5H4B4 570 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 RTCAO00442 366 aaKnown RBP9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 OR7A17O14581 309 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 UGDHO60701 494 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 VPS4BO75351 444 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 SEC24DO94855 1032 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 OTCP00480 354 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 TUBBP07437 444 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 RPS17P08708 135 aaKnown RBP9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 SMIM10L1P0DMW3 83 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 DCTP40126 519 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 NEK2P51955 445 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 OR4D2P58180 307 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 RPS13P62277 151 aaKnown RBP9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 HERVK_113P63132 956 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 CLCQ05315 142 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 PCDH1Q08174 1060 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 IFT88Q13099 833 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 RUNX2Q13950 521 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 AP5B1Q2VPB7 878 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 TMEM35AQ53FP2 167 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 KHDRBS2Q5VWX1 349 aaKnown RBP9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 ABHD17CQ6PCB6 329 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 NDUFAF7Q7L592 441 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 CPEB2Q7Z5Q1 589 aaKnown RBP9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 KBTBD2Q8IY47 623 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 SRRM1Q8IYB3 904 aaKnown RBP9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 CA13Q8N1Q1 262 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 L3MBTL4Q8NA19 623 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 FAM47BQ8NA70 645 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 ARMC2Q8NEN0 867 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 OR4F6Q8NGB9 312 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 ZNF483Q8TF39 744 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 TSLPQ969D9 159 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 ZBTB9Q96C00 473 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 SMIM10Q96HG1 83 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 PTCHD1Q96NR3 888 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 KCNC2Q96PR1 638 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 TMEM237Q96Q45 408 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 SERINC2Q96SA4 455 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 TBCDQ9BTW9 1192 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 ERVK-6Q9BXR3 956 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 MFRPQ9BY79 579 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 ROGDIQ9GZN7 287 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 C12orf65Q9H3J6 166 aaKnown RBP9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 CENPHQ9H3R5 247 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 ELOVL6Q9H5J4 265 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 CLK4Q9HAZ1 481 aaKnown RBP9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 ZBTB26Q9HCK0 441 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 MLXIPLQ9NP71 852 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 RIC8BQ9NVN3 520 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 FBXW2Q9UKT8 454 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 VPS4AQ9UN37 437 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 PCDHGA9Q9Y5G4 932 aaKnown RBP9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 SCN2AQ99250 2005 aa9.8□□□□□ -0.84
TRAPPC12-222ENST00000493792 TNRC6AQ8NDV7 1962 aaKnown RBP9.79□□□□□ -0.84
TRAPPC12-222ENST00000493792 NUP210LQ5VU65 1888 aa9.79□□□□□ -0.84
TRAPPC12-222ENST00000493792 IGHV1-45A0A0A0MS14 117 aa9.79□□□□□ -0.84
TRAPPC12-222ENST00000493792 A8MUA0 341 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms