RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 PINLYPA6NC86 204 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 SDR42E2A6NKP2 422 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 AQP7O14520 342 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 PROM1O43490 865 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 OR2J2O76002 312 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 SMIM10L1P0DMW3 83 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 KIR2DL3P43628 341 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 GPR143P51810 404 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 RAB8AP61006 207 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 HECTD2Q5U5R9 776 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 RTL6Q6ICC9 239 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 TRILQ7L0X0 811 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 SCUBE1Q8IWY4 988 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 CA13Q8N1Q1 262 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 FAM109AQ8N4B1 249 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 GOT1L1Q8NHS2 421 aaPredicted RBP16.41■□□□□ 0.22
NUP50-218ENST00000493456 SLC5A11Q8WWX8 675 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 ATL1Q8WXF7 558 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 SMIM10Q96HG1 83 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 OR4K3Q96R72 315 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 FAM173AQ9BQD7 235 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 DESI2Q9BSY9 194 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 FAM167BQ9BTA0 163 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 PNO1Q9NRX1 252 aaKnown RBP16.41■□□□□ 0.22
NUP50-218ENST00000493456 C20orf96Q9NUD7 363 aaPredicted RBP16.41■□□□□ 0.22
NUP50-218ENST00000493456 ARL15Q9NXU5 204 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 TAS2R13Q9NYV9 303 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 PLEKHA6Q9Y2H5 1048 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 SUSD5O60279 629 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 HAUS5O94927 633 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 HNF4AP41235 474 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 KCNJ1P48048 391 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 DGKQP52824 942 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 ADAM8P78325 824 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 REEP5Q00765 189 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 CSHL1Q14406 222 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 CATSPEREQ5SY80 951 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 IL20RBQ6UXL0 311 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 BIVMQ86UB2 503 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 NEIL2Q969S2 332 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 SARAFQ96BY9 339 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 SPNS1Q9H2V7 528 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 IL1RL2Q9HB29 575 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 XAB2Q9HCS7 855 aaKnown RBP16.4■□□□□ 0.22
NUP50-218ENST00000493456 ADAP2Q9NPF8 381 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 MYOTQ9UBF9 498 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 ACAD8Q9UKU7 415 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 LIPGQ9Y5X9 500 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 MAD1L1Q9Y6D9 718 aa16.4■□□□□ 0.22
NUP50-218ENST00000493456 A0A0G2JMM0 328 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 A0A1W2PPB8 328 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 A0A1W2PRS3 328 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 KIR3DP1A8MWS1 328 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 PRKNO60260 465 aaPredicted RBP16.39■□□□□ 0.21
NUP50-218ENST00000493456 OR6B1O95007 311 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 SERPINA6P08185 405 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 GABRA1P14867 456 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 ADH7P40394 386 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 ZNF75DP51815 510 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 TERF1P54274 439 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 HSD17B7P56937 341 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 C1orf185Q5T7R7 199 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 WLSQ5T9L3 541 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 RIPPLY2Q5TAB7 128 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 PAQR3Q6TCH7 311 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 WDR53Q7Z5U6 358 aaPredicted RBP16.39■□□□□ 0.21
NUP50-218ENST00000493456 TMEM139Q8IV31 216 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 LIX1LQ8IVB5 337 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 TMEM251Q8N6I4 163 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 ANKRD53Q8N9V6 530 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 GOLM1Q8NBJ4 401 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 FBXL8Q96CD0 374 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 LINGO1Q96FE5 620 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 RASL10BQ96S79 203 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 AIF1LQ9BQI0 150 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 TRIM54Q9BYV2 358 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 PELI2Q9HAT8 420 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 HOMER3Q9NSC5 361 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 CRIM1Q9NZV1 1036 aa16.39■□□□□ 0.21
NUP50-218ENST00000493456 A6NNC1 897 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 CLDN4O14493 209 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 CNR1P21554 472 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 SOX3P41225 446 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 MAGEA5P43359 124 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 MAN2A2P49641 1150 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 TIAL1Q01085 375 aaKnown RBP eCLIP16.38■□□□□ 0.21
NUP50-218ENST00000493456 GPS1Q13098 491 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 HYAL4Q2M3T9 481 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 FLYWCH1Q4VC44 716 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 XKR6Q5GH73 641 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 ANKRD22Q5VYY1 191 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 PAMR1Q6UXH9 720 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 C16orf47Q6ZP98 133 aaPredicted RBP16.38■□□□□ 0.21
NUP50-218ENST00000493456 RTL4Q6ZR62 310 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 CDC20BQ86Y33 519 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 TMEM132CQ8N3T6 1108 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 MCUQ8NE86 351 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 FAM222BQ8WU58 562 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 LRRC46Q96FV0 321 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 SGCZQ96LD1 299 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms