RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 KIR2DS5Q14953 304 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 PLCL1Q15111 1095 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 PRSS53Q2L4Q9 553 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 C6orf52Q5T4I8 152 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 PAQR7Q86WK9 346 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 FAM86B1Q8N7N1 296 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 OR52N2Q8NGI0 321 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 JPH3Q8WXH2 748 aaPredicted RBP13.37□□□□□ -0.27
PTPN7-216ENST00000492977 OR5P2Q8WZ92 322 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 MS4A6EQ96DS6 147 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 ORAI3Q9BRQ5 295 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 SLC35A5Q9BS91 424 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 PCED1AQ9H1Q7 454 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 TAS2R7Q9NYW3 318 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 DNAJB9Q9UBS3 223 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 AK5Q9Y6K8 562 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 PLXND1Q9Y4D7 1925 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 TRIOBPQ9H2D6 2365 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 TNRC18O15417 2968 aaPredicted RBP13.37□□□□□ -0.27
PTPN7-216ENST00000492977 KRBA1A5PL33 1030 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 FAM221BA6H8Z2 402 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 PDLIM1O00151 329 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 ZW10O43264 779 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 GUCY1B2O75343 617 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 MT-ND1P03886 318 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 NTRK1P04629 796 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 UQCRC2P22695 453 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 CHN2P52757 468 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 PLA2G16P53816 162 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 NKG7Q16617 165 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 UGT2A3Q6UWM9 527 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 GJD3Q8N144 294 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 C11orf65Q8NCR3 313 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 OR2L5Q8NG80 312 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 FLVCR1-AS1Q8TAF5 88 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 PNPT1Q8TCS8 783 aaKnown RBP13.37□□□□□ -0.27
PTPN7-216ENST00000492977 RLN3Q8WXF3 142 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 VPS50Q96JG6 964 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 KCNC2Q96PR1 638 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 TEFMQ96QE5 360 aaKnown RBP13.37□□□□□ -0.27
PTPN7-216ENST00000492977 OR2A14Q96R47 310 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 C17orf62Q9BQA9 187 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 FAIM2Q9BWQ8 316 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 AICDAQ9GZX7 198 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 KLHL31Q9H511 634 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 NTN4Q9HB63 628 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 EHD3Q9NZN3 535 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 ANKMY1Q9P2S6 941 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 CPNE7Q9UBL6 633 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 ENTPD2Q9Y5L3 495 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 ARHGEF17Q96PE2 2063 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-216ENST00000492977 UPK1AO00322 258 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 PDPK1O15530 556 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 NDUFS2O75306 463 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 SNRNP200O75643 2136 aaKnown RBP13.36□□□□□ -0.27
PTPN7-216ENST00000492977 FKBP9O95302 570 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 CST1P01037 141 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 FAM58BPP0C7Q3 252 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 CTSEP14091 401 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 IL9P15248 144 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 FOSL2P15408 326 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 ZNF23P17027 643 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 PCGF2P35227 344 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 FRKP42685 505 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-216ENST00000492977 ALDH9A1P49189 494 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 MVDP53602 400 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 STXBP1P61764 594 aaKnown RBP13.36□□□□□ -0.27
PTPN7-216ENST00000492977 UBE2IP63279 158 aaKnown RBP13.36□□□□□ -0.27
PTPN7-216ENST00000492977 TXNL4AP83876 142 aaKnown RBP13.36□□□□□ -0.27
PTPN7-216ENST00000492977 TGM3Q08188 693 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 VAC14Q08AM6 782 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 RBBP4Q09028 425 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 GPR18Q14330 331 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 SLC9A5Q14940 896 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 TEAD4Q15561 434 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 NHSL2Q5HYW2 709 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 TJAP1Q5JTD0 557 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.36□□□□□ -0.27
PTPN7-216ENST00000492977 TRIM40Q6P9F5 258 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 ABHD17CQ6PCB6 329 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 TAF8Q7Z7C8 310 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 PARGQ86W56 976 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 MMP21Q8N119 569 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 NAGSQ8N159 534 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 ZCCHC7Q8N3Z6 543 aaKnown RBP13.36□□□□□ -0.27
PTPN7-216ENST00000492977 FRMD1Q8N878 549 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 DPH2Q9BQC3 489 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-216ENST00000492977 TPSD1Q9BZJ3 242 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 TRIM4Q9C037 500 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 TCEAL2Q9H3H9 227 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-216ENST00000492977 PRDM7Q9NQW5 492 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 DLGAP2Q9P1A6 1054 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 PDP2Q9P2J9 529 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 FBXL21Q9UKT6 434 aa13.36□□□□□ -0.27
PTPN7-216ENST00000492977 FAF1Q9UNN5 650 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-216ENST00000492977 MDC1Q14676 2089 aaKnown RBP13.35□□□□□ -0.27
PTPN7-216ENST00000492977 OR2A25A4D2G3 310 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 A6NHS1 94 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 EIF4E1BA6NMX2 242 aaKnown RBP13.35□□□□□ -0.27
PTPN7-216ENST00000492977 METTL12A8MUP2 240 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms