RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 ACSS3Q9H6R3 686 aa14.05□□□□□ -0.16
TOM1-215ENST00000491987 COPS7BQ9H9Q2 264 aaPredicted RBP14.05□□□□□ -0.16
TOM1-215ENST00000491987 PRTFDC1Q9NRG1 225 aa14.05□□□□□ -0.16
TOM1-215ENST00000491987 MMACHCQ9Y4U1 282 aa14.05□□□□□ -0.16
TOM1-215ENST00000491987 PRRC2CQ9Y520 2896 aaKnown RBP14.04□□□□□ -0.16
TOM1-215ENST00000491987 A0A096LPK6 155 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 GABRR3A8MPY1 467 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 ACSL3O95573 720 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 MYBL2P10244 700 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 PCNAP12004 261 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 CD96P40200 585 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 SERPINB8P50452 374 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 MTTPP55157 894 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 OC90Q02509 493 aaPredicted RBP14.04□□□□□ -0.16
TOM1-215ENST00000491987 SLC13A2Q13183 592 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 OR1C1Q15619 314 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 FAM83EQ2M2I3 478 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 CEP128Q6ZU80 1094 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 CCDC91Q7Z6B0 441 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 NFAM1Q8NET5 270 aaPredicted RBP14.04□□□□□ -0.16
TOM1-215ENST00000491987 SERINC2Q96SA4 455 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 HES7Q9BYE0 225 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 KLHL1Q9NR64 748 aa14.04□□□□□ -0.16
TOM1-215ENST00000491987 RP1L1Q8IWN7 2480 aaPredicted RBP14.03□□□□□ -0.16
TOM1-215ENST00000491987 USP9YO00507 2555 aaPredicted RBP14.03□□□□□ -0.16
TOM1-215ENST00000491987 SYCE1LA8MT33 242 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 TGFBR3LH3BV60 316 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 LRRTM2O43300 516 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 SH3BGRLO75368 114 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 MYO1DO94832 1006 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 CRYABP02511 175 aaKnown RBP14.03□□□□□ -0.16
TOM1-215ENST00000491987 ALDOAP04075 364 aaKnown RBP14.03□□□□□ -0.16
TOM1-215ENST00000491987 CTAGE8P0CG41 777 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 MTHFD2P13995 350 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 GFAPP14136 432 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 TYK2P29597 1187 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 PPP2R1BP30154 601 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 CASP2P42575 452 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 LIM2P55344 173 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 KCNK10P57789 538 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 TGM3Q08188 693 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 E2F2Q14209 437 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 NAA30Q147X3 362 aaPredicted RBP14.03□□□□□ -0.16
TOM1-215ENST00000491987 PFKFB4Q16877 469 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 SPINK14Q6IE38 97 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 RPS19BP1Q86WX3 136 aaKnown RBP14.03□□□□□ -0.16
TOM1-215ENST00000491987 RELL1Q8IUW5 271 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 SCUBE1Q8IWY4 988 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 CTAGE4Q8IX94 777 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 ZNF595Q8IYB9 648 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 LGI4Q8N135 537 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 TEX9Q8N6V9 391 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 MDS2Q8NDY4 140 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 RHEBL1Q8TAI7 183 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 ADAMTS18Q8TE60 1221 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 ZNF473Q8WTR7 871 aaKnown RBP14.03□□□□□ -0.16
TOM1-215ENST00000491987 UBE2E3Q969T4 207 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 CSF3RQ99062 836 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 FMO2Q99518 471 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 MS4A8Q9BY19 250 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 VPS11Q9H270 941 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 PRDM7Q9NQW5 492 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 PNO1Q9NRX1 252 aaKnown RBP14.03□□□□□ -0.16
TOM1-215ENST00000491987 DAPP1Q9UN19 280 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 MRPS33Q9Y291 106 aaKnown RBP14.03□□□□□ -0.16
TOM1-215ENST00000491987 ANGPTL3Q9Y5C1 460 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 SCN2AQ99250 2005 aa14.03□□□□□ -0.16
TOM1-215ENST00000491987 WIPF3A6NGB9 483 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 LRRC14BA6NHZ5 514 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 RTCAO00442 366 aaKnown RBP14.02□□□□□ -0.17
TOM1-215ENST00000491987 CLDN4O14493 209 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 TGFB1P01137 390 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 INHBAP08476 426 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 EPB42P16452 691 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 MST1P26927 711 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 TPP2P29144 1249 aaPredicted RBP14.02□□□□□ -0.17
TOM1-215ENST00000491987 ECHS1P30084 290 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 HSD17B7P56937 341 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 DDX39BQ13838 428 aaKnown RBP14.02□□□□□ -0.17
TOM1-215ENST00000491987 SETDB1Q15047 1291 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 ACAP2Q15057 778 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 C4orf17Q53FE4 359 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 ZNF468Q5VIY5 522 aaPredicted RBP14.02□□□□□ -0.17
TOM1-215ENST00000491987 GRHL2Q6ISB3 625 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 MED27Q6P2C8 311 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 KLC3Q6P597 504 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 GFRALQ6UXV0 394 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 ZNF793Q6ZN11 406 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 UBE3DQ7Z6J8 389 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 CLNKQ7Z7G1 428 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 MYLK4Q86YV6 388 aaPredicted RBP14.02□□□□□ -0.17
TOM1-215ENST00000491987 LAS2Q8IYD9 372 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 RNF175Q8N4F7 328 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 OR7G3Q8NG95 312 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 DNAJB8Q8NHS0 232 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 KCNC2Q96PR1 638 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 FUT8Q9BYC5 575 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 DEFB126Q9BYW3 111 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 TSPYL1Q9H0U9 437 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 CPSF2Q9P2I0 782 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms