RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ZNF227Q86WZ6 799 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 SCUBE1Q8IWY4 988 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 F2RL3Q96RI0 385 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 EFCAB11Q9BUY7 163 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 PRDM7Q9NQW5 492 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 PRTFDC1Q9NRG1 225 aa16.84■□□□□ 0.29
HMGN1-219ENST00000491183 A0A1B0GUH1 482 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 UBXN8O00124 270 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 CYR61O00622 381 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 B3GALT2O43825 422 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 KERAO60938 352 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 UNC5CO95185 931 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 S100BP04271 92 aaPredicted RBP16.83■□□□□ 0.28
HMGN1-219ENST00000491183 LTA4HP09960 611 aaKnown RBP16.83■□□□□ 0.28
HMGN1-219ENST00000491183 MTHFD2P13995 350 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 PPP2R1BP30154 601 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 MLF1P58340 268 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 IRF9Q00978 393 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 OC90Q02509 493 aaPredicted RBP16.83■□□□□ 0.28
HMGN1-219ENST00000491183 IRF8Q02556 426 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 CKAP4Q07065 602 aaKnown RBP16.83■□□□□ 0.28
HMGN1-219ENST00000491183 LAPTM5Q13571 262 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 TBCCQ15814 346 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 C8orf74Q6P047 294 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 TRIM40Q6P9F5 258 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 LRRC70Q7Z2Q7 622 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 UBE3DQ7Z6J8 389 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 FJX1Q86VR8 437 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 CENPLQ8N0S6 344 aaPredicted RBP16.83■□□□□ 0.28
HMGN1-219ENST00000491183 APCDD1LQ8NCL9 501 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 ARMC2Q8NEN0 867 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 KCTD4Q8WVF5 259 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 RELTQ969Z4 430 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 MRRFQ96E11 262 aaKnown RBP16.83■□□□□ 0.28
HMGN1-219ENST00000491183 SERINC2Q96SA4 455 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 NUDT4Q9NZJ9 180 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 LRFN1Q9P244 771 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 SEC14L3Q9UDX4 400 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 ACOT9Q9Y305 439 aa16.83■□□□□ 0.28
HMGN1-219ENST00000491183 SUPT3HB4E1H0 165 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 ZG16O60844 167 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 SUPT3HO75486 399 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 URI1O94763 535 aaPredicted RBP16.82■□□□□ 0.28
HMGN1-219ENST00000491183 C2P06681 752 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 SP1P08047 785 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 CD46P15529 392 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 CERS1P27544 350 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 GPR143P51810 404 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 MTTPP55157 894 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 LIM2P55344 173 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 HSD17B7P56937 341 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 PCDH1Q08174 1060 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 BMPR2Q13873 1038 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 MROH9Q5TGP6 573 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 ZNF787Q6DD87 383 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 ARMC10Q8N2F6 343 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 FAM47BQ8NA70 645 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 ZNF473Q8WTR7 871 aaKnown RBP16.82■□□□□ 0.28
HMGN1-219ENST00000491183 C16orf45Q96MC5 204 aaPredicted RBP16.82■□□□□ 0.28
HMGN1-219ENST00000491183 CSF3RQ99062 836 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 PNO1Q9NRX1 252 aaKnown RBP16.82■□□□□ 0.28
HMGN1-219ENST00000491183 KCMF1Q9P0J7 381 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 ZNF223Q9UK11 482 aaPredicted RBP16.82■□□□□ 0.28
HMGN1-219ENST00000491183 DAPP1Q9UN19 280 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 MYO7BQ6PIF6 2116 aa16.82■□□□□ 0.28
HMGN1-219ENST00000491183 A0A088AWK7 358 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 ASPDHA6ND91 283 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 K7EPI3 171 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 CLDN4O14493 209 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 CDK2AP1O14519 115 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 MYO1DO94832 1006 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 ZNF10P21506 573 aaPredicted RBP16.81■□□□□ 0.28
HMGN1-219ENST00000491183 EEF1DP29692 281 aaKnown RBP16.81■□□□□ 0.28
HMGN1-219ENST00000491183 MSH2P43246 934 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 PER3P56645 1201 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 SLC13A2Q13183 592 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 ZRSR2Q15696 482 aaKnown RBP16.81■□□□□ 0.28
HMGN1-219ENST00000491183 HIST2H2ACQ16777 129 aaPredicted RBP16.81■□□□□ 0.28
HMGN1-219ENST00000491183 PAGE2BQ5JRK9 111 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 HIST2H2AA3Q6FI13 130 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 SLC25A25Q6KCM7 469 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 GALNTL5Q7Z4T8 443 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 ZNF595Q8IYB9 648 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 LAS2Q8IYD9 372 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 B3GNT7Q8NFL0 401 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 UBTD2Q8WUN7 234 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 MS4A8Q9BY19 250 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 DEFB126Q9BYW3 111 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 TRIM45Q9H8W5 580 aaPredicted RBP16.81■□□□□ 0.28
HMGN1-219ENST00000491183 SNX15Q9NRS6 342 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 NINJ2Q9NZG7 142 aa16.81■□□□□ 0.28
HMGN1-219ENST00000491183 PPIEQ9UNP9 301 aaKnown RBP16.81■□□□□ 0.28
HMGN1-219ENST00000491183 MYOCOSA0A1B0GUC4 107 aa16.8■□□□□ 0.28
HMGN1-219ENST00000491183 HPDP32754 393 aaPredicted RBP16.8■□□□□ 0.28
HMGN1-219ENST00000491183 TRHRP34981 398 aaPredicted RBP16.8■□□□□ 0.28
HMGN1-219ENST00000491183 DCTP40126 519 aa16.8■□□□□ 0.28
HMGN1-219ENST00000491183 TERF2Q15554 542 aa16.8■□□□□ 0.28
HMGN1-219ENST00000491183 MED27Q6P2C8 311 aa16.8■□□□□ 0.28
HMGN1-219ENST00000491183 ZNF793Q6ZN11 406 aa16.8■□□□□ 0.28
HMGN1-219ENST00000491183 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms