RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 CD86P42081 329 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 TAF6P49848 677 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 NDST2P52849 883 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 SLC8A3P57103 927 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 BTG1P62324 171 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 LPAL2Q16609 132 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 ZNF674Q2M3X9 581 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 GALNT17Q6IS24 598 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 IYDQ6PHW0 289 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 C17orf107Q6ZR85 190 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 FAM131BQ86XD5 332 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 ZNF619Q8N2I2 560 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 ELMOD1Q8N336 334 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 PRSS33Q8NF86 280 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 CHPT1Q8WUD6 406 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 ANKRD9Q96BM1 317 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 UTP14AQ9BVJ6 771 aaKnown RBP4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 ACAT2Q9BWD1 397 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 C5orf66Q9H5L9 145 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 SRD5A3Q9H8P0 318 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 COPS7BQ9H9Q2 264 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 PFASO15067 1338 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 CACNA1FO60840 1977 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 IGHV3OR16-10A0A075B7F0 116 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 CCDC162PA2VCL2 907 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 SDR42E2A6NKP2 422 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 CYSRT1A8MQ03 144 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 ZNF732B4DXR9 585 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 DDX39AO00148 427 aaKnown RBP4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 ECE2O60344 883 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 ACSL4O60488 711 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 LRCH4O75427 683 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 LETM1O95202 739 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 GUCA1CO95843 209 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 C8orf89P0DMQ9 161 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 KRT3P12035 628 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 ACADSP16219 412 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 ITIH1P19827 911 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 ZNF10P21506 573 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 OR3A1P47881 315 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 POLR2FP61218 127 aaKnown RBP4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 CNTN1Q12860 1018 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 LY6DQ14210 128 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 SNAI3Q3KNW1 292 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 ANKRD20A4Q4UJ75 823 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 ANKRD20A8PQ5CZ79 823 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 ANKRD20A2Q5SQ80 823 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 ANKRD20A1Q5TYW2 823 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 ANKRD20A3Q5VUR7 823 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 PM20D1Q6GTS8 502 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 RAB12Q6IQ22 244 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 Q6ZVQ6 151 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 OTOAQ7RTW8 1153 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 RNF130Q86XS8 419 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 ZC3H3Q8IXZ2 948 aaKnown RBP4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 DND1Q8IYX4 353 aaKnown RBP4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 ZNF444Q8N0Y2 327 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 TMEM99Q8N816 258 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 RNF149Q8NC42 400 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 OR7G3Q8NG95 312 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 OR13C5Q8NGS8 318 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 OR2L2Q8NH16 312 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 FAM222BQ8WU58 562 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 SEPT8Q92599 483 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 RASL10AQ92737 203 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 TEKT1Q969V4 418 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 RFT1Q96AA3 541 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 HNRNPABQ99729 332 aaKnown RBP4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 PRMT1Q99873 361 aaKnown RBP4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 UBAC1Q9BSL1 405 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 UBE2TQ9NPD8 197 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 GPR173Q9NS66 373 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 GPR132Q9UNW8 380 aa4.04□□□□□ -1.76
HMGB1P38-201ENST00000490557 GLTPD2A6NH11 291 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 G3V2L1 256 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 SLC33A1O00400 549 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 NDC80O14777 642 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 TLX2O43763 284 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 CLN5O75503 358 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 NXPH4O95158 308 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 SRD5A2P31213 254 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 KRT2P35908 639 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 IL1RL1Q01638 556 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 YWHAHQ04917 246 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 PAX8Q06710 450 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 FCHO2Q0JRZ9 810 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 CEACAM7Q14002 265 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 TAF7Q15545 349 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 ACKR1Q16570 336 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 LRRC38Q5VT99 294 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 ZNF770Q6IQ21 691 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 GBP6Q6ZN66 633 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 CCDC73Q6ZRK6 1079 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 GPRIN3Q6ZVF9 776 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 CATSPER3Q86XQ3 398 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 OR4N5Q8IXE1 308 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 CLYBLQ8N0X4 340 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 SPPL2AQ8TCT8 520 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 BPIFA2Q96DR5 249 aa4.03□□□□□ -1.76
HMGB1P38-201ENST00000490557 ZNF274Q96GC6 653 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms