RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 KLHL31Q9H511 634 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 FBXO5Q9UKT4 447 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 MMACHCQ9Y4U1 282 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 MPDZO75970 2070 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 ARHGAP21Q5T5U3 1957 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 MAGEB16A2A368 324 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 URADA6NGE7 173 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 C4orf51C9J302 202 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 GLSO94925 669 aaPredicted RBP12.96□□□□□ -0.33
VARS-227ENST00000489979 OR6B1O95007 311 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 IGHG3P01860 377 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 HIST1H2AGP0C0S8 130 aaPredicted RBP12.96□□□□□ -0.33
VARS-227ENST00000489979 SMIM10L1P0DMW3 83 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 HIST1H2ADP20671 130 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 PPP2R1BP30154 601 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 MAGEA5P43359 124 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 VPS41P49754 854 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 LTBQ06643 244 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 ZNF750Q32MQ0 723 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 SLC25A35Q3KQZ1 300 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 NDUFAF5Q5TEU4 345 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 HECTD2Q5U5R9 776 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 DUPD1Q68J44 220 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 UGT3A1Q6NUS8 523 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 PAQR3Q6TCH7 311 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 CDC20BQ86Y33 519 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 SCUBE1Q8IWY4 988 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 GPALPP1Q8IXQ4 340 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 MYO1HQ8N1T3 1032 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 RNF10Q8N5U6 811 aaKnown RBP12.96□□□□□ -0.33
VARS-227ENST00000489979 TMEM251Q8N6I4 163 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 ANKRD53Q8N9V6 530 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 OR56A3Q8NH54 315 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 GOT1L1Q8NHS2 421 aaPredicted RBP12.96□□□□□ -0.33
VARS-227ENST00000489979 SLC5A11Q8WWX8 675 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 SREK1Q8WXA9 508 aaKnown RBP12.96□□□□□ -0.33
VARS-227ENST00000489979 SMIM10Q96HG1 83 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 HIST1H2AHQ96KK5 128 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 HIST1H2AJQ99878 128 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 H2AFJQ9BTM1 129 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 C20orf96Q9NUD7 363 aaPredicted RBP12.96□□□□□ -0.33
VARS-227ENST00000489979 ARL15Q9NXU5 204 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 CRIM1Q9NZV1 1036 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 ACAD8Q9UKU7 415 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 EDARQ9UNE0 448 aa12.96□□□□□ -0.33
VARS-227ENST00000489979 PPIEQ9UNP9 301 aaKnown RBP12.96□□□□□ -0.33
VARS-227ENST00000489979 A0A1B0GVC2 190 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 SDR42E2A6NKP2 422 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 TGFBR3LH3BV60 316 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 WWP2O00308 870 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 SOX3P41225 446 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 MAGEA6P43360 314 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 ZNF75DP51815 510 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 REEP5Q00765 189 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 CSHL1Q14406 222 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 SKOR2Q2VWA4 1001 aaPredicted RBP12.95□□□□□ -0.34
VARS-227ENST00000489979 C1orf185Q5T7R7 199 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 Q71RC1 249 aaPredicted RBP12.95□□□□□ -0.34
VARS-227ENST00000489979 TMEM139Q8IV31 216 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 FAM109AQ8N4B1 249 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 CALML6Q8TD86 181 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 SLCO2A1Q92959 643 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 NEIL2Q969S2 332 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 LINGO1Q96FE5 620 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 TSNARE1Q96NA8 513 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 RASL10BQ96S79 203 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 AICDAQ9GZX7 198 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 PRTFDC1Q9NRG1 225 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 ALKBH4Q9NXW9 302 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 MYOTQ9UBF9 498 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 ZKSCAN5Q9Y2L8 839 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 CLDN16Q9Y5I7 305 aa12.95□□□□□ -0.34
VARS-227ENST00000489979 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.94□□□□□ -0.34
VARS-227ENST00000489979 PABPN1LA6NDY0 278 aaKnown RBP12.94□□□□□ -0.34
VARS-227ENST00000489979 A6NNC1 897 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 GOLGA8MH3BSY2 632 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 AQP7O14520 342 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 WDR1O75083 606 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 CELA3AP09093 270 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 MLNP12872 115 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 CNR1P21554 472 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 UQCRC1P31930 480 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 MAN2A2P49641 1150 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 GPS1Q13098 491 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 RBBP5Q15291 538 aaKnown RBP12.94□□□□□ -0.34
VARS-227ENST00000489979 HSP90AA5PQ58FG0 334 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 TOR1AIP1Q5JTV8 583 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 GK5Q6ZS86 529 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 LMNTD2Q8IXW0 634 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 TMEM52Q8NDY8 209 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 TRPV3Q8NET8 790 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 FBXL8Q96CD0 374 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 MBD6Q96DN6 1003 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 SCYL1Q96KG9 808 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 SMR3AQ99954 134 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 FAM173AQ9BQD7 235 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 CNPPD1Q9BV87 410 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 IL1RL2Q9HB29 575 aa12.94□□□□□ -0.34
VARS-227ENST00000489979 IARS2Q9NSE4 1012 aaKnown RBP12.94□□□□□ -0.34
VARS-227ENST00000489979 TAS2R13Q9NYV9 303 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms