RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 CALCOCO2Q13137 446 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 CMPK2Q5EBM0 449 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 SLCO4C1Q6ZQN7 724 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 ZC3HC1Q86WB0 502 aaKnown RBP10.96□□□□□ -0.65
ACTN4-206ENST00000489451 CEP97Q8IW35 865 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 RPRMLQ8N4K4 120 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 B3GNT7Q8NFL0 401 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 C16orf52Q8NHV5 167 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 ATL1Q8WXF7 558 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 QRFPRQ96P65 431 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 CSF3RQ99062 836 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 TRIM31Q9BZY9 425 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 ENKD1Q9H0I2 346 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 SMYD2Q9NRG4 433 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 PLSCR2Q9NRY7 297 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 A0A0G2JMM0 328 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 A0A1B0GTH9 108 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 A0A1W2PPB8 328 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 A0A1W2PRS3 328 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 FAM187AA6NFU0 413 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 KIR3DP1A8MWS1 328 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 E9PLN8 166 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 HS6ST1O60243 411 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 FAM155BO75949 473 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 MYO1DO94832 1006 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 SEC31AO94979 1220 aaKnown RBP10.95□□□□□ -0.66
ACTN4-206ENST00000489451 IGFBP2P18065 325 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 GPR85P60893 370 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 BTN3A2P78410 334 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 CDKL1Q00532 357 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 FRG1Q14331 258 aaKnown RBP10.95□□□□□ -0.66
ACTN4-206ENST00000489451 RBBP5Q15291 538 aaKnown RBP10.95□□□□□ -0.66
ACTN4-206ENST00000489451 TSNQ15631 228 aaKnown RBP10.95□□□□□ -0.66
ACTN4-206ENST00000489451 EMC4Q5J8M3 183 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 SYT10Q6XYQ8 523 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 CD163Q86VB7 1156 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 HORMAD2Q8N7B1 307 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 ZFP62Q8NB50 900 aaPredicted RBP10.95□□□□□ -0.66
ACTN4-206ENST00000489451 FAM98AQ8NCA5 519 aaKnown RBP10.95□□□□□ -0.66
ACTN4-206ENST00000489451 TRPV3Q8NET8 790 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 SPATA4Q8NEY3 305 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 FAM57AQ8TBR7 257 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 RHBDF1Q96CC6 855 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 MS4A6EQ96DS6 147 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 VKORC1Q9BQB6 163 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 AIF1LQ9BQI0 150 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 TMEM79Q9BSE2 394 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 LIN28AQ9H9Z2 209 aaKnown RBP10.95□□□□□ -0.66
ACTN4-206ENST00000489451 CLK4Q9HAZ1 481 aaKnown RBP10.95□□□□□ -0.66
ACTN4-206ENST00000489451 DYRK1BQ9Y463 629 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 MMACHCQ9Y4U1 282 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 OARD1Q9Y530 152 aa10.95□□□□□ -0.66
ACTN4-206ENST00000489451 PHF3Q92576 2039 aaKnown RBP10.95□□□□□ -0.66
ACTN4-206ENST00000489451 FAM95CA0A1B0GW59 222 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 LRIT2A6NDA9 550 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 CYR61O00622 381 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 TAPBPO15533 448 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 ZNF354AO60765 605 aaPredicted RBP10.94□□□□□ -0.66
ACTN4-206ENST00000489451 ITGA10O75578 1167 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 WDR47O94967 919 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 MLYCDO95822 493 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 EPORP19235 508 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 TFEBP19484 476 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 CD22P20273 847 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 SAT1P21673 171 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 GMPRP36959 345 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 TFF3Q07654 80 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 SLBPQ14493 270 aaKnown RBP eCLIP10.94□□□□□ -0.66
ACTN4-206ENST00000489451 ADPRMQ3LIE5 342 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 FBXO48Q5FWF7 155 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 XKR6Q5GH73 641 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 NIPAL1Q6NVV3 410 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 ANKMY2Q8IV38 441 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 ZNF321PQ8N8H1 164 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 OR52N2Q8NGI0 321 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 NCLNQ969V3 563 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 GAL3ST3Q96A11 431 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 SDCCAG3Q96C92 435 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 C14orf79Q96F83 325 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 SPOCK3Q9BQ16 436 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 TRIM54Q9BYV2 358 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 DEFB126Q9BYW3 111 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 NPDC1Q9NQX5 325 aaPredicted RBP10.94□□□□□ -0.66
ACTN4-206ENST00000489451 PNO1Q9NRX1 252 aaKnown RBP10.94□□□□□ -0.66
ACTN4-206ENST00000489451 MOCS1Q9NZB8 636 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 PPT2Q9UMR5 302 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 UTP11Q9Y3A2 253 aaKnown RBP10.94□□□□□ -0.66
ACTN4-206ENST00000489451 KCNE2Q9Y6J6 123 aa10.94□□□□□ -0.66
ACTN4-206ENST00000489451 DNAJC13O75165 2243 aa10.93□□□□□ -0.66
ACTN4-206ENST00000489451 MYOCOSA0A1B0GUC4 107 aa10.93□□□□□ -0.66
ACTN4-206ENST00000489451 E7ESA3 106 aa10.93□□□□□ -0.66
ACTN4-206ENST00000489451 PSMD12O00232 456 aaPredicted RBP10.93□□□□□ -0.66
ACTN4-206ENST00000489451 FCHO1O14526 889 aa10.93□□□□□ -0.66
ACTN4-206ENST00000489451 PRRG2O14669 202 aa10.93□□□□□ -0.66
ACTN4-206ENST00000489451 FANCGO15287 622 aa10.93□□□□□ -0.66
ACTN4-206ENST00000489451 ERI3O43414 337 aaKnown RBP10.93□□□□□ -0.66
ACTN4-206ENST00000489451 PEX1O43933 1283 aa10.93□□□□□ -0.66
ACTN4-206ENST00000489451 C1QAP02745 245 aa10.93□□□□□ -0.66
ACTN4-206ENST00000489451 C1GALT1C1LP0DN25 315 aa10.93□□□□□ -0.66
ACTN4-206ENST00000489451 PTGS2P35354 604 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms