RNA–Protein interactions for RNA: ENST00000489283.5

PLS3-207, Transcript of plastin 3, humanhuman

TSL 1 (best)

Gene PLS3, Length 926 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-207ENST00000489283 RAB10P61026 200 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 TERF2Q15554 542 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 PDK4Q16654 411 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 ADPRMQ3LIE5 342 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 KRTCAP3Q53RY4 240 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 XKR6Q5GH73 641 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 SP5Q6BEB4 398 aaPredicted RBP13.12□□□□□ -0.31
PLS3-207ENST00000489283 SULT1C3Q6IMI6 304 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 MTFR2Q6P444 385 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 TRIM40Q6P9F5 258 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 C3orf62Q6ZUJ4 267 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 MAATS1Q7Z4T9 603 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 MRGPRGQ86SM5 289 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 SIAH3Q8IW03 269 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 CTAGE3PQ8IX95 158 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 ZNF808Q8N4W9 903 aaPredicted RBP13.12□□□□□ -0.31
PLS3-207ENST00000489283 CPSF7Q8N684 471 aaKnown RBP13.12□□□□□ -0.31
PLS3-207ENST00000489283 B3GNT7Q8NFL0 401 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 OR2L5Q8NG80 312 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 ADAMTS18Q8TE60 1221 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 PTCD3Q96EY7 689 aaKnown RBP13.12□□□□□ -0.31
PLS3-207ENST00000489283 SEC16BQ96JE7 1060 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 QRFPRQ96P65 431 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 CSF3RQ99062 836 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 PITHD1Q9GZP4 211 aaPredicted RBP13.12□□□□□ -0.31
PLS3-207ENST00000489283 REXO4Q9GZR2 422 aaKnown RBP13.12□□□□□ -0.31
PLS3-207ENST00000489283 TRIM45Q9H8W5 580 aaPredicted RBP13.12□□□□□ -0.31
PLS3-207ENST00000489283 PNO1Q9NRX1 252 aaKnown RBP13.12□□□□□ -0.31
PLS3-207ENST00000489283 CD274Q9NZQ7 290 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 ZNF223Q9UK11 482 aaPredicted RBP13.12□□□□□ -0.31
PLS3-207ENST00000489283 ZNF835Q9Y2P0 537 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 CLDN16Q9Y5I7 305 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 GTF3C1Q12789 2109 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 NOTCH2Q04721 2471 aa13.12□□□□□ -0.31
PLS3-207ENST00000489283 CCNT2O60583 730 aaKnown RBP13.11□□□□□ -0.31
PLS3-207ENST00000489283 STK16O75716 305 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 FAM155BO75949 473 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 S100BP04271 92 aaPredicted RBP13.11□□□□□ -0.31
PLS3-207ENST00000489283 GSTA2P09210 222 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 ZNF24P17028 368 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 EPORP19235 508 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 TRHRP34981 398 aaPredicted RBP13.11□□□□□ -0.31
PLS3-207ENST00000489283 HLCSP50747 726 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 CLCN2P51788 898 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 HSD17B7P56937 341 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 ADORA2A-AS1P86434 159 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 HSF1Q00613 529 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 SLC13A2Q13183 592 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 ART3Q13508 389 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 DOC2AQ14183 400 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 SLMAPQ14BN4 828 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 CDKL4Q5MAI5 379 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 RPTNQ6XPR3 784 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 Q6ZPB1 254 aaPredicted RBP13.11□□□□□ -0.31
PLS3-207ENST00000489283 CYS1Q717R9 158 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 CLNKQ7Z7G1 428 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 ARMC10Q8N2F6 343 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 NCLNQ969V3 563 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 KIAA1191Q96A73 305 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 TMEM125Q96AQ2 219 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 WDR34Q96EX3 536 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 VMP1Q96GC9 406 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 UBXN10Q96LJ8 280 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 SERINC2Q96SA4 455 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 PHACTR1Q9C0D0 580 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 COPS7BQ9H9Q2 264 aaPredicted RBP13.11□□□□□ -0.31
PLS3-207ENST00000489283 PTBP2Q9UKA9 531 aaKnown RBP13.11□□□□□ -0.31
PLS3-207ENST00000489283 FBXW2Q9UKT8 454 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 ZNF490Q9ULM2 529 aaPredicted RBP13.11□□□□□ -0.31
PLS3-207ENST00000489283 RNF112Q9ULX5 631 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 MRPS33Q9Y291 106 aaKnown RBP13.11□□□□□ -0.31
PLS3-207ENST00000489283 ASB1Q9Y576 335 aa13.11□□□□□ -0.31
PLS3-207ENST00000489283 KLF2Q9Y5W3 355 aaPredicted RBP13.11□□□□□ -0.31
PLS3-207ENST00000489283 CLDN4O14493 209 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 ZNHIT1O43257 154 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 ASNA1O43681 348 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 ITGA10O75578 1167 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 SLC35E2BP0CK96 405 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 PRF1P14222 555 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 HPDP32754 393 aaPredicted RBP13.1□□□□□ -0.31
PLS3-207ENST00000489283 SPRP35270 261 aaPredicted RBP13.1□□□□□ -0.31
PLS3-207ENST00000489283 MEOX1P50221 254 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 PLTPP55058 493 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 MTTPP55157 894 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 LIM2P55344 173 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 DLG1Q12959 904 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 EFTUD2Q15029 972 aaKnown RBP eCLIP13.1□□□□□ -0.314e-6■■■□□ 14.8
PLS3-207ENST00000489283 KBTBD12Q3ZCT8 623 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 RNFT1Q5M7Z0 435 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 ABHD17CQ6PCB6 329 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 BNC2Q6ZN30 1099 aaPredicted RBP13.1□□□□□ -0.31
PLS3-207ENST00000489283 LRRC70Q7Z2Q7 622 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 CMC1Q7Z7K0 106 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 CCDC25Q86WR0 208 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 SPPL2CQ8IUH8 684 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 ZNF595Q8IYB9 648 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 PPM1NQ8N819 430 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 FBXO25Q8TCJ0 367 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 EFCAB11Q9BUY7 163 aa13.1□□□□□ -0.31
PLS3-207ENST00000489283 ALG9Q9H6U8 611 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms