RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 CHIT1Q13231 466 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 ZRSR2Q15696 482 aaKnown RBP11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 MAPKAPK3Q16644 382 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 HIST2H2ACQ16777 129 aaPredicted RBP11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 HIST2H2AA3Q6FI13 130 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 SLC25A25Q6KCM7 469 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 TRIM40Q6P9F5 258 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 ABHD17CQ6PCB6 329 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 ZNF572Q7Z3I7 529 aaPredicted RBP11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 GALNTL5Q7Z4T8 443 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 CLNKQ7Z7G1 428 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 TBC1D1Q86TI0 1168 aaPredicted RBP11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 LGI4Q8N135 537 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 HORMAD2Q8N7B1 307 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 OR2L5Q8NG80 312 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 THAP3Q8WTV1 239 aaPredicted RBP11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 NXNL1Q96CM4 212 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 WDR34Q96EX3 536 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 SCMH1Q96GD3 660 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 SEC16BQ96JE7 1060 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 LRRC1Q9BTT6 524 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 DEFB126Q9BYW3 111 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 PHACTR1Q9C0D0 580 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 TSPAN10Q9H1Z9 355 aaPredicted RBP11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 NMRAL1Q9HBL8 299 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 PRTFDC1Q9NRG1 225 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 IGSF5Q9NSI5 407 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 MMACHCQ9Y4U1 282 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 PCDHGB6Q9Y5F9 930 aa11.16□□□□□ -0.62
CCHCR1-215ENST00000488920 A0A088AWK7 358 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 TRBV11-1A0A0K0K1C0 115 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 NPIPA5E9PKD4 350 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 CCL21O00585 134 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 CYR61O00622 381 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 SH3BGRLO75368 114 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 LTA4HP09960 611 aaKnown RBP11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 ZNF10P21506 573 aaPredicted RBP11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 CERS1P27544 350 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 HPDP32754 393 aaPredicted RBP11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 MSH2P43246 934 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 CYB561P49447 251 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 MTTPP55157 894 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 LIM2P55344 173 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 HSD17B7P56937 341 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 RAB38P57729 211 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 ALDH6A1Q02252 535 aaKnown RBP11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 LAPTM5Q13571 262 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 BMPR2Q13873 1038 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 TBCCQ15814 346 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 ADPRMQ3LIE5 342 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 PAGE2BQ5JRK9 111 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 MROH9Q5TGP6 573 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 UBE3DQ7Z6J8 389 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 ZNF227Q86WZ6 799 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 SCUBE1Q8IWY4 988 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 TMEM178AQ8NBL3 297 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 APCDD1LQ8NCL9 501 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 KCTD4Q8WVF5 259 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 SERINC2Q96SA4 455 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 ATOH8Q96SQ7 321 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 CSF3RQ99062 836 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 EFCAB11Q9BUY7 163 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 COPS7BQ9H9Q2 264 aaPredicted RBP11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 PRDM7Q9NQW5 492 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 ZDHHC18Q9NUE0 388 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 NUDT4Q9NZJ9 180 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 SH3BGRL2Q9UJC5 107 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 NPIPA1Q9UND3 350 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 ACOT9Q9Y305 439 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 UNC79Q9P2D8 2635 aa11.15□□□□□ -0.62
CCHCR1-215ENST00000488920 HMX2A2RU54 273 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 ASPDHA6ND91 283 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 FCHO1O14526 889 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 KERAO60938 352 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 SLC25A12O75746 678 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 URI1O94763 535 aaPredicted RBP11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 PCNAP12004 261 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 CASP2P42575 452 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 HLCSP50747 726 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 CLCN2P51788 898 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 IRF9Q00978 393 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 RBPJQ06330 500 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 CKAP4Q07065 602 aaKnown RBP11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 TGM3Q08188 693 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 NAB1Q13506 487 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 UAP1Q16222 522 aaPredicted RBP11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 UBAP2Q5T6F2 1119 aaKnown RBP11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 C8orf74Q6P047 294 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 LRRC70Q7Z2Q7 622 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 ZNF595Q8IYB9 648 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 B3GNT7Q8NFL0 401 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 SREK1Q8WXA9 508 aaKnown RBP11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 NCLNQ969V3 563 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 FRMD6Q96NE9 622 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 KCNC2Q96PR1 638 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 KCMF1Q9P0J7 381 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 OPTCQ9UBM4 332 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 ZNF223Q9UK11 482 aaPredicted RBP11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 FBXW2Q9UKT8 454 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms