RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 SIX3O95343 332 aaPredicted RBP3.22□□□□□ -1.89
SSR1-209ENST00000488834 HPP00738 406 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 HOXD4P09016 255 aaPredicted RBP3.22□□□□□ -1.89
SSR1-209ENST00000488834 ITIH1P19827 911 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 TIA1P31483 386 aaKnown RBP eCLIP3.22□□□□□ -1.89
SSR1-209ENST00000488834 FCGR2BP31994 310 aaPredicted RBP3.22□□□□□ -1.89
SSR1-209ENST00000488834 FCGR2CP31995 323 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 ABCE1P61221 599 aaKnown RBP3.22□□□□□ -1.89
SSR1-209ENST00000488834 ZFP36L1Q07352 338 aaKnown RBP3.22□□□□□ -1.89
SSR1-209ENST00000488834 PPP2R5CQ13362 524 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 MLF2Q15773 248 aaPredicted RBP3.22□□□□□ -1.89
SSR1-209ENST00000488834 ECSCRQ19T08 205 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 NHSL2Q5HYW2 709 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 MPP7Q5T2T1 576 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 KLHL10Q6JEL2 608 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 CASC1Q6TDU7 716 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 MCM10Q7L590 875 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 KCNMB4Q86W47 210 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 ZC3H3Q8IXZ2 948 aaKnown RBP3.22□□□□□ -1.89
SSR1-209ENST00000488834 CARNMT1Q8N4J0 409 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 TMCO5AQ8N6Q1 288 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 ARL10Q8N8L6 244 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 OR13C5Q8NGS8 318 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 SGF29Q96ES7 293 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 VMP1Q96GC9 406 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 FOXN4Q96NZ1 517 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 LRRCC1Q9C099 1032 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 MOB1AQ9H8S9 216 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 COPS7BQ9H9Q2 264 aaPredicted RBP3.22□□□□□ -1.89
SSR1-209ENST00000488834 VPS18Q9P253 973 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 STYXL1Q9Y6J8 313 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 MYH15Q9Y2K3 1946 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 A0A1W2PPR1 153 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 ILVBLA1L0T0 632 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 CCDC162PA2VCL2 907 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 TRIM64A6NGJ6 449 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 TRIM64BA6NI03 449 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 ARHGEF33A8MVX0 844 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 ZNF732B4DXR9 585 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 H0Y626 953 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 MLNRO43193 412 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 GALR3O60755 368 aaPredicted RBP3.21□□□□□ -1.9
SSR1-209ENST00000488834 CRCPO75575 148 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 EDNRAP25101 427 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 CCND3P30281 292 aaPredicted RBP3.21□□□□□ -1.9
SSR1-209ENST00000488834 ETV5P41161 510 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 PEX3P56589 373 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 FAM182AQ5T1J6 154 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 C11orf88Q6PI97 169 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 TIPARPQ7Z3E1 657 aaKnown RBP3.21□□□□□ -1.9
SSR1-209ENST00000488834 GLRX5Q86SX6 157 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 HOOK3Q86VS8 718 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 TUSC5Q8IXB3 177 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 SLC43A2Q8N370 569 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 NHLRC2Q8NBF2 726 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 AFAP1L1Q8TED9 768 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 CKAP2Q8WWK9 683 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 BPIFA2Q96DR5 249 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 ZNF274Q96GC6 653 aaPredicted RBP3.21□□□□□ -1.9
SSR1-209ENST00000488834 ANKRD27Q96NW4 1050 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 PARK7Q99497 189 aaKnown RBP3.21□□□□□ -1.9
SSR1-209ENST00000488834 ATG101Q9BSB4 218 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 IDI2Q9BXS1 227 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 OCR1Q9BZK8 76 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 ADNPQ9H2P0 1102 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 DBNDD1Q9H9R9 158 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 GNB4Q9HAV0 340 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 IL1RAPQ9NPH3 570 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 PILRAQ9UKJ1 303 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 SH3GLB1Q9Y371 365 aa3.21□□□□□ -1.9
SSR1-209ENST00000488834 TRGV8A0A0C4DH27 118 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 TRIM49BA6NDI0 452 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 A8MU76 341 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 ST8SIA3O43173 380 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 B4GAT1O43505 415 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 ACSL4O60488 711 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 RAD51DO75771 328 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 MUTP22033 750 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 IL4RP24394 825 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 SRD5A2P31213 254 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 ZFP36L2P47974 494 aaKnown RBP3.2□□□□□ -1.9
SSR1-209ENST00000488834 CRYBA2P53672 197 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 EVCP57679 992 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 AKAP17AQ02040 695 aaKnown RBP3.2□□□□□ -1.9
SSR1-209ENST00000488834 RBBP4Q09028 425 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 CEACAM7Q14002 265 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 KNOP1Q1ED39 458 aaKnown RBP3.2□□□□□ -1.9
SSR1-209ENST00000488834 RFTN2Q52LD8 501 aaPredicted RBP3.2□□□□□ -1.9
SSR1-209ENST00000488834 DNAJC21Q5F1R6 531 aaKnown RBP3.2□□□□□ -1.9
SSR1-209ENST00000488834 SLC25A30Q5SVS4 291 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 ATAD1Q8NBU5 361 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 RNF149Q8NC42 400 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 GDAP1Q8TB36 358 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 SMPDL3AQ92484 453 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 SEPT8Q92599 483 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 CORO2AQ92828 525 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 MR1Q95460 341 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 CCDC47Q96A33 483 aaKnown RBP3.2□□□□□ -1.9
SSR1-209ENST00000488834 TBC1D31Q96DN5 1066 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms