RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 KIR3DP1A8MWS1 328 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 ACOT7O00154 380 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 OR2J2O76002 312 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 ZFAND5O76080 213 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 SERPINA6P08185 405 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 ACVR2AP27037 513 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 FOLH1Q04609 750 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 CRYMQ14894 314 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 RBBP5Q15291 538 aaKnown RBP18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 XKR6Q5GH73 641 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 HECTD2Q5U5R9 776 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 TGIF2LYQ8IUE0 185 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 GPALPP1Q8IXQ4 340 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 NAT8LQ8N9F0 302 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 OR10Q1Q8NGQ4 319 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 SMC6Q96SB8 1091 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 AIF1LQ9BQI0 150 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 TTTY12Q9BZ98 90 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 DYRK1BQ9Y463 629 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 L3MBTL1Q9Y468 752 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 LIPGQ9Y5X9 500 aa18.07■□□□□ 0.48
SMPDL3A-202ENST00000487215 OR6B1O95007 311 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 AHSGP02765 367 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 PGAM1P18669 254 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 HNRNPFP52597 415 aaKnown RBP18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 BTN3A2P78410 334 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 PDAP1Q13442 181 aaKnown RBP18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 RUNX2Q13950 521 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 ZNF585AQ6P3V2 769 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 NXPE4Q6UWF7 544 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 IL20RBQ6UXL0 311 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 RGS9BPQ6ZS82 235 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 TMEM52Q8NDY8 209 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 ASB15Q8WXK1 588 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 NINJ1Q92982 152 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 MAGOHBQ96A72 148 aaKnown RBP18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 TTYH2Q9BSA4 534 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 LZTFL1Q9NQ48 299 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 PRTFDC1Q9NRG1 225 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 CCM2LQ9NUG4 571 aaPredicted RBP18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 DNAJB12Q9NXW2 375 aaKnown RBP18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 IKZF3Q9UKT9 509 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 FAM215AQ9Y5M1 114 aa18.06■□□□□ 0.48
SMPDL3A-202ENST00000487215 PHF3Q92576 2039 aaKnown RBP18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 A0A0G2JN53 185 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 OR14I1A6ND48 311 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 FIGNL2A6NMB9 653 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 G3V3Y1 287 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 BCKDKO14874 412 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 NRDCO43847 1150 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 GLSO94925 669 aaPredicted RBP18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 ENO2P09104 434 aaPredicted RBP18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 GLI4P10075 376 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 SOX3P41225 446 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 DLX5P56178 289 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 HSD17B7P56937 341 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 RTL6Q6ICC9 239 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 SBSNQ6UWP8 590 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 B3GNT6Q6ZMB0 384 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 SLC22A16Q86VW1 577 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 THOC6Q86W42 341 aaKnown RBP18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 CNTN4Q8IWV2 1026 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 CHDHQ8NE62 594 aaPredicted RBP18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 RASL10BQ96S79 203 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 ADAP2Q9NPF8 381 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 SLC17A6Q9P2U8 582 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 MYOTQ9UBF9 498 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 SLC22A14Q9Y267 594 aa18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 ZNF469Q96JG9 3925 aaPredicted RBP18.05■□□□□ 0.48
SMPDL3A-202ENST00000487215 A0A0G2JNJ9 132 aa18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 CTAG2O75638 210 aa18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 IGHG3P01860 377 aa18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 SAT1P21673 171 aa18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 ZFP36L2P47974 494 aaKnown RBP18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 RAB38P57729 211 aa18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 STXBP1P61764 594 aaKnown RBP18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 SLC13A2Q13183 592 aa18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 NDUFAF5Q5TEU4 345 aa18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 LIX1LQ8IVB5 337 aa18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 TMEM251Q8N6I4 163 aa18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 MYRIPQ8NFW9 859 aa18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 GABPB2Q8TAK5 448 aaPredicted RBP18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 SREK1Q8WXA9 508 aaKnown RBP18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 GAL3ST3Q96A11 431 aa18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 FAR2Q96K12 515 aa18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 NPLQ9BXD5 320 aaPredicted RBP18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 Q9UFV3 132 aa18.04■□□□□ 0.48
SMPDL3A-202ENST00000487215 WWP2O00308 870 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 CLDN4O14493 209 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 KLK2P20151 261 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 MAGEA5P43359 124 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 CCZ1BP86790 482 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 CCZ1P86791 482 aaPredicted RBP18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 PPP1R3AQ16821 1122 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 ZNF750Q32MQ0 723 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 BBS9Q3SYG4 887 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 GK5Q6ZS86 529 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 TRILQ7L0X0 811 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 CLNKQ7Z7G1 428 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms