RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 PRTFDC1Q9NRG1 225 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 GPRC5BQ9NZH0 403 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 CD274Q9NZQ7 290 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 FBXW2Q9UKT8 454 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 ZNF835Q9Y2P0 537 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 MMACHCQ9Y4U1 282 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 CLDN16Q9Y5I7 305 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 CSMD1Q96PZ7 3565 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 MYOCOSA0A1B0GUC4 107 aa22.92■■□□□ 1.26
LIME1-206ENST00000487026 ASNA1O43681 348 aa22.92■■□□□ 1.26
LIME1-206ENST00000487026 B3GALT2O43825 422 aa22.92■■□□□ 1.26
LIME1-206ENST00000487026 CLEC3AO75596 197 aa22.92■■□□□ 1.26
LIME1-206ENST00000487026 C1QAP02745 245 aa22.92■■□□□ 1.26
LIME1-206ENST00000487026 GP5P40197 560 aa22.92■■□□□ 1.26
LIME1-206ENST00000487026 KCNC1P48547 511 aa22.92■■□□□ 1.26
LIME1-206ENST00000487026 HLCSP50747 726 aa22.92■■□□□ 1.26
LIME1-206ENST00000487026 RAB38P57729 211 aa22.92■■□□□ 1.26
LIME1-206ENST00000487026 HSF1Q00613 529 aa22.92■■□□□ 1.26
LIME1-206ENST00000487026 SULT1C3Q6IMI6 304 aa22.92■■□□□ 1.26
LIME1-206ENST00000487026 MAATS1Q7Z4T9 603 aa22.92■■□□□ 1.26
LIME1-206ENST00000487026 CLNKQ7Z7G1 428 aa22.92■■□□□ 1.26
LIME1-206ENST00000487026 SCUBE1Q8IWY4 988 aa22.92■■□□□ 1.26
LIME1-206ENST00000487026 REXO4Q9GZR2 422 aaKnown RBP22.92■■□□□ 1.26
LIME1-206ENST00000487026 CNOT10Q9H9A5 744 aaKnown RBP22.92■■□□□ 1.26
LIME1-206ENST00000487026 PCNX1Q96RV3 2341 aa22.92■■□□□ 1.26
LIME1-206ENST00000487026 CCNT2O60583 730 aaKnown RBP22.91■■□□□ 1.26
LIME1-206ENST00000487026 MLYCDO95822 493 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 ESRRAP11474 423 aaPredicted RBP22.91■■□□□ 1.26
LIME1-206ENST00000487026 CD22P20273 847 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 CERS1P27544 350 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 TRHRP34981 398 aaPredicted RBP22.91■■□□□ 1.26
LIME1-206ENST00000487026 CLCN2P51788 898 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 PLTPP55058 493 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 ATP6V0D1P61421 351 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 ADORA2A-AS1P86434 159 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 ILF2Q12905 390 aaKnown RBP22.91■■□□□ 1.26
LIME1-206ENST00000487026 SLC13A2Q13183 592 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 TRADDQ15628 312 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 PDK4Q16654 411 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 MTFR2Q6P444 385 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 ZNF808Q8N4W9 903 aaPredicted RBP22.91■■□□□ 1.26
LIME1-206ENST00000487026 OR2L5Q8NG80 312 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 SREK1Q8WXA9 508 aaKnown RBP22.91■■□□□ 1.26
LIME1-206ENST00000487026 TMEM125Q96AQ2 219 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 UBXN10Q96LJ8 280 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 F2RL3Q96RI0 385 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 TRIM45Q9H8W5 580 aaPredicted RBP22.91■■□□□ 1.26
LIME1-206ENST00000487026 ZNF223Q9UK11 482 aaPredicted RBP22.91■■□□□ 1.26
LIME1-206ENST00000487026 PTBP2Q9UKA9 531 aaKnown RBP22.91■■□□□ 1.26
LIME1-206ENST00000487026 ASB1Q9Y576 335 aa22.91■■□□□ 1.26
LIME1-206ENST00000487026 CLDN4O14493 209 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 FCHO1O14526 889 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 EPORP19235 508 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 RFC3P40938 356 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 HSD17B7P56937 341 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 RAB10P61026 200 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 ZKSCAN8Q15776 578 aaPredicted RBP22.9■■□□□ 1.26
LIME1-206ENST00000487026 ADPRMQ3LIE5 342 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 KBTBD12Q3ZCT8 623 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 CDKL4Q5MAI5 379 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 TRIM40Q6P9F5 258 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 ABHD17CQ6PCB6 329 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 CYS1Q717R9 158 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 CCDC25Q86WR0 208 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 PPM1NQ8N819 430 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 ADAMTS18Q8TE60 1221 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 NCLNQ969V3 563 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 KIAA1191Q96A73 305 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 PTCD3Q96EY7 689 aaKnown RBP22.9■■□□□ 1.26
LIME1-206ENST00000487026 CSF3RQ99062 836 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 PITHD1Q9GZP4 211 aaPredicted RBP22.9■■□□□ 1.26
LIME1-206ENST00000487026 EHD1Q9H4M9 534 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 RNF112Q9ULX5 631 aa22.9■■□□□ 1.26
LIME1-206ENST00000487026 KLF2Q9Y5W3 355 aaPredicted RBP22.9■■□□□ 1.26
LIME1-206ENST00000487026 ABCA12Q86UK0 2595 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 A0A088AWK7 358 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 CDK2AP1O14519 115 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 PRKNO60260 465 aaPredicted RBP22.89■■□□□ 1.25
LIME1-206ENST00000487026 ZNF24P17028 368 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 ZNF10P21506 573 aaPredicted RBP22.89■■□□□ 1.25
LIME1-206ENST00000487026 GSTM2P28161 218 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 HTR1EP28566 365 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 SPRP35270 261 aaPredicted RBP22.89■■□□□ 1.25
LIME1-206ENST00000487026 GPR143P51810 404 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 LIM2P55344 173 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 DLG1Q12959 904 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 RPTNQ6XPR3 784 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 C16orf47Q6ZP98 133 aaPredicted RBP22.89■■□□□ 1.25
LIME1-206ENST00000487026 Q6ZPB1 254 aaPredicted RBP22.89■■□□□ 1.25
LIME1-206ENST00000487026 NCCRP1Q6ZVX7 275 aaPredicted RBP22.89■■□□□ 1.25
LIME1-206ENST00000487026 CMC1Q7Z7K0 106 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 SULF2Q8IWU5 870 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 ARMC10Q8N2F6 343 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 C17orf53Q8N3J3 647 aaPredicted RBP22.89■■□□□ 1.25
LIME1-206ENST00000487026 PDPRQ8NCN5 879 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 SEC16BQ96JE7 1060 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 SERINC2Q96SA4 455 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 ALG9Q9H6U8 611 aa22.89■■□□□ 1.25
LIME1-206ENST00000487026 LIN28AQ9H9Z2 209 aaKnown RBP22.89■■□□□ 1.25
LIME1-206ENST00000487026 PRDM7Q9NQW5 492 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms