RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 SLC37A2Q8TED4 501 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 NCSTNQ92542 709 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 COX14Q96I36 57 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 ERGIC2Q96RQ1 377 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 PEBP4Q96S96 227 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 MGME1Q9BQP7 344 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 HERPUD2Q9BSE4 406 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 SYT11Q9BT88 431 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 ABHD14AQ9BUJ0 271 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 TRIM2Q9C040 744 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 NUP62CLQ9H1M0 184 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 STN1Q9H668 368 aaKnown RBP3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 ZNF556Q9HAH1 456 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 ZNF71Q9NQZ8 489 aaPredicted RBP3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 GOLGA6AQ9NYA3 693 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 TAS2R14Q9NYV8 317 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 VPS18Q9P253 973 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 LIMA1Q9UHB6 759 aaKnown RBP3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 DNPEPQ9ULA0 475 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 MAN2B2Q9Y2E5 1009 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 TMEM98Q9Y2Y6 226 aa3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 DIDO1Q9BTC0 2240 aaKnown RBP3.86□□□□□ -1.79
SNRNP40-205ENST00000486941 CCDC88CQ9P219 2028 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 RELNP78509 3460 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 POLEQ07864 2286 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 A0A0G2JNG1 304 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 A0A0J9YYE9 177 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 GXYLT2A0PJZ3 443 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 RGSL1A5PLK6 1076 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 A6NCN8 305 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 CXorf65A6NEN9 183 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 LILRA5A6NI73 299 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 A8MU76 341 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 LGALS16A8MUM7 142 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 MKRN2OSH3BPM6 223 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 TOX3O15405 576 aaPredicted RBP3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 LRCH4O75427 683 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 STK17BO94768 372 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 EML2O95834 649 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 TRBC1P01850 177 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 C9P02748 559 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 MYBL1P10243 752 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 PRKAR1AP10644 381 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 F3P13726 295 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 CTPS1P17812 591 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 XRCC1P18887 633 aaPredicted RBP3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 F8A1P23610 371 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 SERPINB6P35237 376 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 GSTM5P46439 218 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 PCYT1AP49585 367 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 PPM1FP49593 454 aaPredicted RBP3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 ENTPD1P49961 510 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 CLCNKAP51800 687 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 STC1P52823 247 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 MAXP61244 160 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 RPL26P61254 145 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 UBXN1Q04323 297 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 IL11RAQ14626 422 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 KIR2DS5Q14953 304 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 DEFB109BQ30KR1 87 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 ENTPD8Q5MY95 495 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 DOK6Q6PKX4 331 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 SLC16A12Q6ZSM3 486 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 RFLNAQ6ZTI6 216 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 Q6ZTK2 550 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 MARK2Q7KZI7 788 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 TRIM74Q86UV6 250 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 CCDC13Q8IYE1 715 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 ATPAF2Q8N5M1 289 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 FAM47BQ8NA70 645 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 TEX19Q8NA77 164 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 GLIS1Q8NBF1 620 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 TEKT4Q8WW24 435 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 STARD8Q92502 1023 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 CSPG4P5Q96PW8 444 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 LYSMD1Q96S90 227 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 CTRCQ99895 268 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 RIOK2Q9BVS4 552 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 UCK1Q9HA47 277 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 MRPL47Q9HD33 250 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 APMAPQ9HDC9 416 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 NT5MQ9NPB1 228 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 PRDM8Q9NQV8 689 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 ETNK2Q9NVF9 386 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 CNOT8Q9UFF9 292 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 TBC1D29Q9UFV1 150 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 AMACRQ9UHK6 382 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 CD84Q9UIB8 345 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 KCND3Q9UK17 655 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 RPL26L1Q9UNX3 145 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 SNX13Q9Y5W8 968 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 RPS6KL1Q9Y6S9 549 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 SCINQ9Y6U3 715 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 MN1Q10571 1320 aaPredicted RBP3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 PIKFYVEQ9Y2I7 2098 aa3.85□□□□□ -1.79
SNRNP40-205ENST00000486941 DOPEY1Q5JWR5 2465 aa3.84□□□□□ -1.79
SNRNP40-205ENST00000486941 A0A0U1RQS6 177 aa3.84□□□□□ -1.79
SNRNP40-205ENST00000486941 DPPA5A6NC42 116 aa3.84□□□□□ -1.79
SNRNP40-205ENST00000486941 GOLGA6L3A6NEY3 463 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms