RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 ZZZ3Q8IYH5 903 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 SAMD14Q8IZD0 417 aaPredicted RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 CLECL1Q8IZS7 167 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 FAM160A2Q8N612 972 aaPredicted RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 FRMD1Q8N878 549 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 FAM46DQ8NEK8 389 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 OR4A15Q8NGL6 344 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 BAHD1Q8TBE0 780 aaPredicted RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 LRTOMTQ8WZ04 291 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 TBC1D20Q96BZ9 403 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 ZBED6CLQ96FA7 236 aaPredicted RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 ZNF570Q96NI8 536 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 TEFMQ96QE5 360 aaKnown RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 OR2A5Q96R48 311 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 BDH2Q9BUT1 245 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 TRIM8Q9BZR9 551 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 AICDAQ9GZX7 198 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 CHRNA10Q9GZZ6 450 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 Q9H521 79 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 TMEM38AQ9H6F2 299 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 THUMPD1Q9NXG2 353 aaKnown RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 THEGQ9P2T0 379 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 RPS6KA6Q9UK32 745 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 SAMD4AQ9UPU9 718 aaKnown RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 ASB4Q9Y574 426 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 CSNK1G3Q9Y6M4 447 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 REV3LO60673 3130 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 LMO7DNF2Z398 122 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 PDPK1O15530 556 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 ERI3O43414 337 aaKnown RBP11.06□□□□□ -0.64
PRKCB-207ENST00000486868 DENRO43583 198 aaKnown RBP11.06□□□□□ -0.64
PRKCB-207ENST00000486868 TMPRSS11DO60235 418 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 DPM1O60762 260 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 DEAF1O75398 565 aaPredicted RBP11.06□□□□□ -0.64
PRKCB-207ENST00000486868 C6orf47O95873 294 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 LDLRP01130 860 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 GSNP06396 782 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 FAM58BPP0C7Q3 252 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 SLC35G6P0C7Q6 338 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 UQCRBP14927 111 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 NCK1P16333 377 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 POLR2CP19387 275 aaPredicted RBP11.06□□□□□ -0.64
PRKCB-207ENST00000486868 PCGF2P35227 344 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 CCT8P50990 548 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 HBA1P69905 142 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 MC1RQ01726 317 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 CEBPEQ15744 281 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 SFT2D3Q587I9 215 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 TOR1AIP1Q5JTV8 583 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 TMTC4Q5T4D3 741 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 FCRL6Q6DN72 434 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 HMBOX1Q6NT76 420 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 ZNF793Q6ZN11 406 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 ZNF551Q7Z340 670 aaPredicted RBP11.06□□□□□ -0.64
PRKCB-207ENST00000486868 PTOV1Q86YD1 416 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 PLD3Q8IV08 490 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 ZNF655Q8N720 491 aaPredicted RBP11.06□□□□□ -0.64
PRKCB-207ENST00000486868 ACOT4Q8N9L9 421 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 MAFAQ8NHW3 353 aaPredicted RBP11.06□□□□□ -0.64
PRKCB-207ENST00000486868 ZFP28Q8NHY6 868 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 FIG4Q92562 907 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 FAM162AQ96A26 154 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 EME1Q96AY2 570 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 PPWD1Q96BP3 646 aaKnown RBP11.06□□□□□ -0.64
PRKCB-207ENST00000486868 AURKBQ96GD4 344 aaPredicted RBP11.06□□□□□ -0.64
PRKCB-207ENST00000486868 ZFYVE21Q9BQ24 234 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 C9orf16Q9BUW7 83 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 CHID1Q9BWS9 393 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 TRIM4Q9C037 500 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 RAB33BQ9H082 229 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 EPS8L2Q9H6S3 715 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 HRASLS2Q9NWW9 162 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 DLGAP2Q9P1A6 1054 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 ZNF639Q9UID6 485 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 AURKCQ9UQB9 309 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 ZNF451Q9Y4E5 1061 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 C5orf42Q9H799 3197 aa11.06□□□□□ -0.64
PRKCB-207ENST00000486868 TRBV23OR9-2A0A075B6M9 112 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 RTCAO00442 366 aaKnown RBP11.05□□□□□ -0.64
PRKCB-207ENST00000486868 TXNDC9O14530 226 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 TNFRSF21O75509 655 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 TIPRLO75663 272 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 B3GALT4O96024 378 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 GBAP04062 536 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 KDELR2P33947 212 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 MAGEA2P43356 314 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 RXRGP48443 463 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 MVDP53602 400 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 PLA2G16P53816 162 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 EPHA4P54764 986 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 BIRC2Q13490 618 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 MYBPC3Q14896 1274 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 SUZ12Q15022 739 aaKnown RBP11.05□□□□□ -0.64
PRKCB-207ENST00000486868 ADRM1Q16186 407 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 ZNF630Q2M218 657 aaPredicted RBP11.05□□□□□ -0.64
PRKCB-207ENST00000486868 ANKRD26P1Q6NSI1 321 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 NIPAL1Q6NVV3 410 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 ARMC6Q6NXE6 501 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 ZCCHC8Q6NZY4 707 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms