RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 KLHL35Q6PF15 583 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 HSPBAP1Q96EW2 488 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 TMEM121BQ9BXQ6 578 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-216ENST00000486741 HEMK1Q9Y5R4 338 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-216ENST00000486741 PSME4Q14997 1843 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 SEC16AO15027 2179 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 FAM25AB3EWG3 89 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 FAM25CB3EWG5 89 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 FAM25GB3EWG6 89 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 ARNTLO00327 626 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 AK4P27144 223 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-216ENST00000486741 AKT2P31751 481 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 RPL4P36578 427 aaKnown RBP12.68□□□□□ -0.38
HMGN1-216ENST00000486741 RPS21P63220 83 aaKnown RBP12.68□□□□□ -0.38
HMGN1-216ENST00000486741 SLAMF1Q13291 335 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 PRRT3Q5FWE3 981 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 RPS26P11Q5JNZ5 115 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-216ENST00000486741 ERI1Q8IV48 349 aaKnown RBP12.68□□□□□ -0.38
HMGN1-216ENST00000486741 NRSN1Q8IZ57 195 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 ZNF347Q96SE7 839 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 M0R129 80 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 FXYD1O00168 92 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 PIM1P11309 404 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-216ENST00000486741 COPZ1P61923 177 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 SLC13A2Q13183 592 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 EIF4EBP2Q13542 120 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-216ENST00000486741 RAPSNQ13702 412 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 HLA-DQA1Q5Y7H0 255 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 ALG1LQ6GMV1 187 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 REEP3Q6NUK4 255 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 DRAXINQ8NBI3 349 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-216ENST00000486741 GIN1Q9NXP7 522 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 MED16Q9Y2X0 877 aa12.68□□□□□ -0.38
HMGN1-216ENST00000486741 PRMT3O60678 531 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 CDC123O75794 336 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-216ENST00000486741 HSD17B2P37059 387 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 RPS3AP61247 264 aaKnown RBP12.67□□□□□ -0.38
HMGN1-216ENST00000486741 ZNF155Q12901 538 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-216ENST00000486741 XKR7Q5GH72 579 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 KIAA1614Q5VZ46 1190 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 ZNF773Q6PK81 442 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 C6orf120Q7Z4R8 191 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 TMEM203Q969S6 136 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 DOHHQ9BU89 302 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 ANKRD60Q9BZ19 345 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 EIF3FO00303 357 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-216ENST00000486741 TFPTP0C1Z6 253 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 AZGP1P25311 298 aaKnown RBP12.67□□□□□ -0.38
HMGN1-216ENST00000486741 MMP12P39900 470 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 PRLHRP49683 370 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 VBP1P61758 197 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 OLR1P78380 273 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 EXOC3L2Q2M3D2 409 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 SPATS1Q496A3 300 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 RBM48Q5RL73 367 aaKnown RBP12.67□□□□□ -0.38
HMGN1-216ENST00000486741 C12orf40Q86WS4 652 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 PLA2G15Q8NCC3 412 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 OR52L1Q8NGH7 329 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 RAB2BQ8WUD1 216 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 HTRA1Q92743 480 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 RAB7BQ96AH8 199 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 RBM18Q96H35 190 aaKnown RBP12.67□□□□□ -0.38
HMGN1-216ENST00000486741 COQ7Q99807 217 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 GPATCH1Q9BRR8 931 aaKnown RBP12.67□□□□□ -0.38
HMGN1-216ENST00000486741 DNAJC27Q9NZQ0 273 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 ACSL5Q9ULC5 683 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 PLXNA1Q9UIW2 1896 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 H1F0P07305 194 aaKnown RBP12.67□□□□□ -0.38
HMGN1-216ENST00000486741 NR2F6P10588 404 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 CA5AP35218 305 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 RGNQ15493 299 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 ZNF630Q2M218 657 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-216ENST00000486741 TIMM50Q3ZCQ8 353 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 AMZ1Q400G9 498 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 IKZF5Q9H5V7 419 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 TIMMDC1Q9NPL8 285 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 DCAF13Q9NV06 445 aaKnown RBP12.67□□□□□ -0.38
HMGN1-216ENST00000486741 P2RX2Q9UBL9 471 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 ABCG2Q9UNQ0 655 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 OR51B4Q9Y5P0 310 aa12.67□□□□□ -0.38
HMGN1-216ENST00000486741 SMIM30A4D0T7 59 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 ABCB7O75027 752 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 HOXB6P17509 224 aaKnown RBP12.66□□□□□ -0.38
HMGN1-216ENST00000486741 MATN1P21941 496 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 HRH2P25021 359 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 P2RY2P41231 377 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 PFN3P60673 137 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 TIGD6Q17RP2 521 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 ZNF554Q86TJ5 538 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 FAM129BQ96TA1 746 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 CDV3Q9UKY7 258 aaKnown RBP12.66□□□□□ -0.38
HMGN1-216ENST00000486741 CDH7Q9ULB5 785 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 CABIN1Q9Y6J0 2220 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 B3GALT2O43825 422 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 ADH1BP00325 375 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 HSD3B1P14060 373 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 HSD3B2P26439 372 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 MLLT10P55197 1068 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 TUBA4AP68366 448 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 HBA1P69905 142 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms