RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 LSM12Q3MHD2 195 aaKnown RBP12.11□□□□□ -0.47
HDAC6-229ENST00000486665 DEFB134Q4QY38 66 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 DCAF12Q5T6F0 453 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 ARHGAP40Q5TG30 622 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 C1orf189Q5VU69 101 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 NXNQ6DKJ4 435 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 TRIM40Q6P9F5 258 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 RIPOR1Q6ZS17 1223 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 ABHD13Q7L211 337 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 COMMD6Q7Z4G1 85 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 PIGWQ7Z7B1 504 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 ZNF605Q86T29 641 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 ZFAND4Q86XD8 727 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 TMEM126BQ8IUX1 230 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 LSM14AQ8ND56 463 aaKnown RBP12.11□□□□□ -0.47
HDAC6-229ENST00000486665 ZNF248Q8NDW4 579 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 OR9A4Q8NGU2 314 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-229ENST00000486665 C11orf24Q96F05 449 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-229ENST00000486665 PPP3R2Q96LZ3 170 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 ZNF578Q96N58 590 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-229ENST00000486665 KCNC2Q96PR1 638 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 TBCDQ9BTW9 1192 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 NDC1Q9BTX1 674 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 TMEM120AQ9BXJ8 343 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 ACTR5Q9H9F9 607 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-229ENST00000486665 AHSPQ9NZD4 102 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 KLHL14Q9P2G3 628 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 NAALAD2Q9Y3Q0 740 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 TMEM184BQ9Y519 407 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-229ENST00000486665 BSNQ9UPA5 3926 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 URADA6NGE7 173 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 ZNF860A6NHJ4 632 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 DSCR3O14972 297 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 SNX3O60493 162 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 GALR3O60755 368 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-229ENST00000486665 VPS4BO75351 444 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 DXOO77932 396 aaKnown RBP12.1□□□□□ -0.47
HDAC6-229ENST00000486665 KIAA0754O94854 1291 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 TNFSF15O95150 251 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 LBPP18428 481 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 ITGAXP20702 1163 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 HIST1H1TP22492 207 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-229ENST00000486665 TPP2P29144 1249 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-229ENST00000486665 SSR2P43308 183 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 OR1D4P47884 311 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 ARSFP54793 590 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 RAB15P59190 212 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 RPL38P63173 70 aaKnown RBP12.1□□□□□ -0.47
HDAC6-229ENST00000486665 OLR1P78380 273 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 EMX2Q04743 252 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 TGM3Q08188 693 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 ACSM2AQ08AH3 577 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 RUNX2Q13950 521 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 FAM53BQ14153 422 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 LY6DQ14210 128 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 HERC3Q15034 1050 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 MUM1Q2TAK8 710 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 ATP6AP1LQ52LC2 224 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 YOD1Q5VVQ6 348 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-229ENST00000486665 TMEM198Q66K66 360 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 ACSM2BQ68CK6 577 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 NOXRED1Q6NXP6 359 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 CYB5D1Q6P9G0 228 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 CEACAM20Q6UY09 585 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 SPATA21Q7Z572 469 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 ACOT4Q8N9L9 421 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 SRFBP1Q8NEF9 429 aaKnown RBP12.1□□□□□ -0.47
HDAC6-229ENST00000486665 OR5T3Q8NGG3 340 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 C10orf82Q8WW14 230 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 FCRL1Q96LA6 429 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 SIKE1Q9BRV8 207 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 CENPKQ9BS16 269 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 CCDC28BQ9BUN5 200 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 C1orf50Q9BV19 199 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 DDA1Q9BW61 102 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 EBPLQ9BY08 206 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 NSRP1Q9H0G5 558 aaKnown RBP12.1□□□□□ -0.47
HDAC6-229ENST00000486665 DDX31Q9H8H2 851 aaKnown RBP12.1□□□□□ -0.47
HDAC6-229ENST00000486665 POLR1BQ9H9Y6 1135 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 ANKHQ9HCJ1 492 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 SIRT5Q9NXA8 310 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 NDOR1Q9UHB4 597 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 G3BP2Q9UN86 482 aaKnown RBP12.1□□□□□ -0.47
HDAC6-229ENST00000486665 DLGAP4Q9Y2H0 992 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 POLR3HQ9Y535 204 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-229ENST00000486665 PCDHB3Q9Y5E6 796 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 PCDHGA3Q9Y5H0 932 aa12.1□□□□□ -0.47
HDAC6-229ENST00000486665 MAST4O15021 2626 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 A0A0A6YYD5 115 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 ERVH48-1M5A8F1 160 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 KLK10O43240 276 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 TMPRSS11DO60235 418 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 PCDH7O60245 1069 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 RDH16O75452 317 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 NSA2O95478 260 aaKnown RBP12.09□□□□□ -0.47
HDAC6-229ENST00000486665 ALDOCP09972 364 aaKnown RBP12.09□□□□□ -0.47
HDAC6-229ENST00000486665 ATXN8OSP0DMR3 200 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 SPTBP11277 2137 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 TACR1P25103 407 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms