RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 FMO2Q99518 471 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 LPAR4Q99677 370 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 TBCDQ9BTW9 1192 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 REXO4Q9GZR2 422 aaKnown RBP6.58□□□□□ -1.36
VPS50-218ENST00000485994 ALG9Q9H6U8 611 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 TRIM45Q9H8W5 580 aaPredicted RBP6.58□□□□□ -1.36
VPS50-218ENST00000485994 PRDM7Q9NQW5 492 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 ASF1BQ9NVP2 202 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 WWOXQ9NZC7 414 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 KCMF1Q9P0J7 381 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 HCN3Q9P1Z3 774 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 TMCO1Q9UM00 188 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 TNPO3Q9Y5L0 923 aaKnown RBP6.58□□□□□ -1.36
VPS50-218ENST00000485994 CROCCQ5TZA2 2017 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 DNAJC13O75165 2243 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 A0A096LPK6 155 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 NCF1BA6NI72 391 aaPredicted RBP6.57□□□□□ -1.36
VPS50-218ENST00000485994 NCF1CA8MVU1 366 aaPredicted RBP6.57□□□□□ -1.36
VPS50-218ENST00000485994 CYR61O00622 381 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 CLDN4O14493 209 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 CCNT2O60583 730 aaKnown RBP6.57□□□□□ -1.36
VPS50-218ENST00000485994 CTNSO60931 367 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 KRT38O76015 456 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 SCELO95171 688 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 ZIC2O95409 532 aaPredicted RBP6.57□□□□□ -1.36
VPS50-218ENST00000485994 WDPCPO95876 746 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 STATHP02808 62 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 S100BP04271 92 aaPredicted RBP6.57□□□□□ -1.36
VPS50-218ENST00000485994 SERPIND1P05546 499 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 ABHD2P08910 425 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 NCF1P14598 390 aaPredicted RBP6.57□□□□□ -1.36
VPS50-218ENST00000485994 EPB42P16452 691 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 CD22P20273 847 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 GNLYP22749 145 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 PIK3CBP42338 1070 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 GPR143P51810 404 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 RAB38P57729 211 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 OR4D2P58180 307 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 SLC26A5P58743 744 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 RAB8AP61006 207 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 BTN3A2P78410 334 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 IRF8Q02556 426 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 EEF1A2Q05639 463 aaKnown RBP6.57□□□□□ -1.36
VPS50-218ENST00000485994 TGM3Q08188 693 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 CHIT1Q13231 466 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 RCN2Q14257 317 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 SLBPQ14493 270 aaKnown RBP eCLIP6.57□□□□□ -1.36
VPS50-218ENST00000485994 ABRAXAS2Q15018 415 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 EFTUD2Q15029 972 aaKnown RBP eCLIP6.57□□□□□ -1.36
VPS50-218ENST00000485994 SETDB1Q15047 1291 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 BTBD16Q32M84 506 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 MINDY4Q4G0A6 757 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 SFT2D3Q587I9 215 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 XKR6Q5GH73 641 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 TOR1AIP1Q5JTV8 583 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 RNFT1Q5M7Z0 435 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 ACER2Q5QJU3 275 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 C10orf62Q5T681 223 aaPredicted RBP6.57□□□□□ -1.36
VPS50-218ENST00000485994 FHL5Q5TD97 284 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 LGSNQ5TDP6 509 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 ABHD17BQ5VST6 288 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 FAAH2Q6GMR7 532 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 GRHL2Q6ISB3 625 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 KLC3Q6P597 504 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 TRIM40Q6P9F5 258 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 PAPD4Q6PIY7 484 aaKnown RBP6.57□□□□□ -1.36
VPS50-218ENST00000485994 LANCL3Q6ZV70 420 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 CHSY3Q70JA7 882 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 TRMT10CQ7L0Y3 403 aaKnown RBP6.57□□□□□ -1.36
VPS50-218ENST00000485994 VN1R5Q7Z5H4 357 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 LCA5Q86VQ0 697 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 SCUBE1Q8IWY4 988 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 IFT20Q8IY31 132 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 SHISA5Q8N114 240 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 L3MBTL4Q8NA19 623 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 CATSPER1Q8NEC5 780 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 ARMC2Q8NEN0 867 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 NFAM1Q8NET5 270 aaPredicted RBP6.57□□□□□ -1.36
VPS50-218ENST00000485994 OR7G3Q8NG95 312 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 OR5T3Q8NGG3 340 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 OR1N1Q8NGS0 311 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 ZCCHC10Q8TBK6 192 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 ZNF473Q8WTR7 871 aaKnown RBP6.57□□□□□ -1.36
VPS50-218ENST00000485994 C19orf60Q96EN9 201 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 CMTM7Q96FZ5 175 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 KCNC2Q96PR1 638 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 SERINC2Q96SA4 455 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 NTMT1Q9BV86 223 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 CDC42EP4Q9H3Q1 356 aaKnown RBP6.57□□□□□ -1.36
VPS50-218ENST00000485994 LYRM4Q9HD34 91 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 SNX15Q9NRS6 342 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 ABI3Q9P2A4 366 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 PTGFRNQ9P2B2 879 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 OPTCQ9UBM4 332 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 FETUBQ9UGM5 382 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 DAPP1Q9UN19 280 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 MRPS33Q9Y291 106 aaKnown RBP6.57□□□□□ -1.36
VPS50-218ENST00000485994 PCDHGA11Q9Y5H2 935 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 CLDN16Q9Y5I7 305 aa6.57□□□□□ -1.36
VPS50-218ENST00000485994 CSAG2Q9Y5P2 127 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms