RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 RCN2Q14257 317 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 KRT71Q3SY84 523 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 MINDY4Q4G0A6 757 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 SRRM1Q8IYB3 904 aaKnown RBP16.75■□□□□ 0.27
SREBF1-213ENST00000485080 C9orf43Q8TAL5 461 aaPredicted RBP16.75■□□□□ 0.27
SREBF1-213ENST00000485080 TRPC4APQ8TEL6 797 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 METTL21AQ8WXB1 218 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 RGMAQ96B86 450 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 SMC6Q96SB8 1091 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 MTERF1Q99551 399 aaKnown RBP16.75■□□□□ 0.27
SREBF1-213ENST00000485080 SLC29A3Q9BZD2 475 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 GSTO2Q9H4Y5 243 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 C19orf25Q9UFG5 118 aaPredicted RBP16.75■□□□□ 0.27
SREBF1-213ENST00000485080 DAPP1Q9UN19 280 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 MMACHCQ9Y4U1 282 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 PRRC2CQ9Y520 2896 aaKnown RBP16.75■□□□□ 0.27
SREBF1-213ENST00000485080 IGHV1-45A0A0A0MS14 117 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 SYNDIG1LA6NDD5 238 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 PSMD12O00232 456 aaPredicted RBP16.74■□□□□ 0.27
SREBF1-213ENST00000485080 CCL11P51671 97 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 RAB38P57729 211 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 RPS13P62277 151 aaKnown RBP16.74■□□□□ 0.27
SREBF1-213ENST00000485080 ZNF33BQ06732 778 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 IFT88Q13099 833 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 MYBPC3Q14896 1274 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 AP5B1Q2VPB7 878 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 OR4C11Q6IEV9 310 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 ZNF793Q6ZN11 406 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 GPRIN3Q6ZVF9 776 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 RPS27LQ71UM5 84 aaKnown RBP16.74■□□□□ 0.27
SREBF1-213ENST00000485080 HPS6Q86YV9 775 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 ZCCHC7Q8N3Z6 543 aaKnown RBP16.74■□□□□ 0.27
SREBF1-213ENST00000485080 GALNT16Q8N428 558 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 ACOT4Q8N9L9 421 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 IMMP1LQ96LU5 166 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 ZIM3Q96PE6 472 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 SERPINI1Q99574 410 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 SMAD5Q99717 465 aaKnown RBP16.74■□□□□ 0.27
SREBF1-213ENST00000485080 SLC25A23Q9BV35 468 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 ZNF717Q9BY31 904 aaPredicted RBP16.74■□□□□ 0.27
SREBF1-213ENST00000485080 IQCGQ9H095 443 aaKnown RBP16.74■□□□□ 0.27
SREBF1-213ENST00000485080 OR51B5Q9H339 312 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 COPS7BQ9H9Q2 264 aaPredicted RBP16.74■□□□□ 0.27
SREBF1-213ENST00000485080 BRF2Q9HAW0 419 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 SSU72Q9NP77 194 aaKnown RBP16.74■□□□□ 0.27
SREBF1-213ENST00000485080 RIC8BQ9NVN3 520 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 KCMF1Q9P0J7 381 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 SNX6Q9UNH7 406 aa16.74■□□□□ 0.27
SREBF1-213ENST00000485080 FASNP49327 2511 aaKnown RBP16.73■□□□□ 0.27
SREBF1-213ENST00000485080 IGKV3D-11A0A0A0MRZ8 115 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 A0A0G2JN53 185 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 BLACEA4D250 179 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 CYR61O00622 381 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 PLPP1O14494 284 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 RGS16O15492 202 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-213ENST00000485080 TYROBPO43914 113 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 PRMT3O60678 531 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 ESRRBO95718 433 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 ENO1P06733 434 aaKnown RBP16.73■□□□□ 0.27
SREBF1-213ENST00000485080 ICAM2P13598 275 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 CERS1P27544 350 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 ARL1P40616 181 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-213ENST00000485080 NEK2P51955 445 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 NAGLUP54802 743 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 LIM2P55344 173 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 DDX39BQ13838 428 aaKnown RBP16.73■□□□□ 0.27
SREBF1-213ENST00000485080 PCOLCEQ15113 449 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 LACTB2Q53H82 288 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-213ENST00000485080 LIPMQ5VYY2 423 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 RIPOR1Q6ZS17 1223 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 FRMD7Q6ZUT3 714 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 CPEB2Q7Z5Q1 589 aaKnown RBP16.73■□□□□ 0.27
SREBF1-213ENST00000485080 ZNF595Q8IYB9 648 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 RNF175Q8N4F7 328 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 FDCSPQ8NFU4 85 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 C8orf44Q96CB5 159 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 PGM2Q96G03 612 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 MESP1Q9BRJ9 268 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 TUBB6Q9BUF5 446 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 ELOVL6Q9H5J4 265 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 DDX31Q9H8H2 851 aaKnown RBP16.73■□□□□ 0.27
SREBF1-213ENST00000485080 PRDM9Q9NQV7 894 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 GPR83Q9NYM4 423 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 C5AR2Q9P296 337 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 G3BP2Q9UN86 482 aaKnown RBP16.73■□□□□ 0.27
SREBF1-213ENST00000485080 ACTL7BQ9Y614 415 aa16.73■□□□□ 0.27
SREBF1-213ENST00000485080 SCN2AQ99250 2005 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 NSG1A0A0A6YYJ2 146 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 EIF4E1BA6NMX2 242 aaKnown RBP16.72■□□□□ 0.27
SREBF1-213ENST00000485080 CTIFO43310 598 aaKnown RBP16.72■□□□□ 0.27
SREBF1-213ENST00000485080 C1QL1O75973 258 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 ETHE1O95571 254 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 HSD3B1P14060 373 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 TSPAN8P19075 237 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 HSD3B2P26439 372 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 BSGP35613 385 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 HSD17B7P56937 341 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 AP2B1P63010 937 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 PCLAFQ15004 111 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 ABRAXAS2Q15018 415 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms