RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 PPIEQ9UNP9 301 aaKnown RBP10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 VPS9D1Q9Y2B5 631 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 CLDN16Q9Y5I7 305 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 HIVEP2P31629 2446 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 NCKAP5O14513 1909 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 FAM171A2A8MVW0 826 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 INAFM1C9JVW0 142 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 H7C1Q1 480 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 PSMD12O00232 456 aaPredicted RBP10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 WWP2O00308 870 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 SUSD5O60279 629 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 ZFAND5O76080 213 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 EPXP11678 715 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 RNH1P13489 461 aaKnown RBP10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 OGNP20774 298 aaKnown RBP10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 CNR1P21554 472 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 RPL22P35268 128 aaKnown RBP10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 NPY2RP49146 381 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 SNX1Q13596 522 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 POU4F3Q15319 338 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 TERF2Q15554 542 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 FBXL19-AS1Q494R0 122 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 HECTD2Q5U5R9 776 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 LCTLQ6UWM7 567 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 GK5Q6ZS86 529 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 CXorf67Q86X51 503 aaPredicted RBP10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 CILP2Q8IUL8 1156 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 GPALPP1Q8IXQ4 340 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 CA13Q8N1Q1 262 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 ARMC2Q8NEN0 867 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 TNIP2Q8NFZ5 429 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 OR4K1Q8NGD4 311 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 LINC01560Q8TB33 94 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 NT5CQ8TCD5 201 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 CD200R1Q8TD46 325 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 C1orf54Q8WWF1 131 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 KIAA1191Q96A73 305 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 SARAFQ96BY9 339 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 SCYL1Q96KG9 808 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 CAPZA3Q96KX2 299 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 GPR21Q99679 349 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 AARSD1Q9BTE6 412 aaKnown RBP10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 KLHL31Q9H511 634 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 LDAHQ9H6V9 325 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 MYOTQ9UBF9 498 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 ZNF148Q9UQR1 794 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 PDE10AQ9Y233 779 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 REXO2Q9Y3B8 237 aaKnown RBP10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 KIAA1549Q9HCM3 1950 aa10.06□□□□□ -0.8
SMARCC1-205ENST00000483847 TRGV5A0A0B4J1U4 118 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 TRBC2A0A5B9 178 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 TUBAL3A6NHL2 446 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 CLCA1A8K7I4 914 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 HSPB2A8KAH6 182 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 FAM47E-STBD1D6RA91 191 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 DVL2O14641 736 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 SMAD7O15105 426 aaKnown RBP10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 PFDN6O15212 129 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 FTCDO95954 541 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 SMIM10L1P0DMW3 83 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 CCL3P10147 92 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 ENO3P13929 434 aaPredicted RBP10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 CCR8P51685 355 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 HNRNPFP52597 415 aaKnown RBP10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 SKP1P63208 163 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 CTBP1Q13363 440 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 SLC10A1Q14973 349 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 HSPB2Q16082 182 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 HYAL4Q2M3T9 481 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 Q5PR19 223 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 CATSPEREQ5SY80 951 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 SHEQ5VZ18 495 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 ZNF470Q6ECI4 717 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 KIAA0930Q6ICG6 404 aaPredicted RBP10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 NEPROQ6NW34 567 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 RTL4Q6ZR62 310 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 FAM47EQ6ZV65 393 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 ABHD13Q7L211 337 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 PEX26Q7Z412 305 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 DENND6AQ8IWF6 608 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 ULK2Q8IYT8 1036 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 UBL4BQ8N7F7 174 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 TMEM52Q8NDY8 209 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 ABHD11Q8NFV4 315 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 PYCR2Q96C36 320 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 SMIM10Q96HG1 83 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 OR4K3Q96R72 315 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 CCDC77Q9BR77 488 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 AICDAQ9GZX7 198 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 EXO5Q9H790 373 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 EIF2B3Q9NR50 452 aaKnown RBP10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 FBXO6Q9NRD1 293 aaPredicted RBP10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 BEX4Q9NWD9 120 aaPredicted RBP10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 BFARQ9NZS9 450 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 KLHL42Q9P2K6 505 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 AMFRQ9UKV5 643 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 SOX13Q9UN79 622 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 DHRS7Q9Y394 339 aa10.05□□□□□ -0.8
SMARCC1-205ENST00000483847 MYOCOSA0A1B0GUC4 107 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 AVILO75366 819 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms