RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 RIMKLBQ9ULI2 386 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 MRPS33Q9Y291 106 aaKnown RBP10.88□□□□□ -0.67
SMPD4-218ENST00000482171 ZNFX1Q9P2E3 1918 aaKnown RBP10.87□□□□□ -0.67
SMPD4-218ENST00000482171 ACOX3O15254 700 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 MT-ND2P03891 347 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 SRPRAP08240 638 aaKnown RBP10.87□□□□□ -0.67
SMPD4-218ENST00000482171 BTN3A2P78410 334 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 PON2Q15165 354 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 HNRNPA1L2Q32P51 320 aaKnown RBP10.87□□□□□ -0.67
SMPD4-218ENST00000482171 HACD2Q6Y1H2 254 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 NPAS3Q8IXF0 933 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 RGMAQ96B86 450 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 APIPQ96GX9 242 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 F2RL3Q96RI0 385 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 TIGARQ9NQ88 270 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 CLEC4AQ9UMR7 237 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 CYP8B1Q9UNU6 501 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 RNF6Q9Y252 685 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 SEC16AO15027 2179 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 BCHEP06276 602 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 YES1P07947 543 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 PSKH1P11801 424 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 ATP12AP54707 1039 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 PTSQ03393 145 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 HYAL2Q12891 473 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 FAM78AQ5JUQ0 283 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 OR2T5Q6IEZ7 315 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 TMEM207Q6UWW9 146 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 BHLHA9Q7RTU4 235 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.87□□□□□ -0.67
SMPD4-218ENST00000482171 OR2T29Q8NH02 315 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 HUS1BQ8NHY5 278 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 ZFP90Q8TF47 636 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 NCSTNQ92542 709 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 AP3S1Q92572 193 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 FCGR1BQ92637 280 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 CCDC59Q9P031 241 aaKnown RBP10.87□□□□□ -0.67
SMPD4-218ENST00000482171 COMMD3Q9UBI1 195 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 MAFFQ9ULX9 164 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 CFL2Q9Y281 166 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 PCDHGB5Q9Y5G0 923 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 MAGED1Q9Y5V3 778 aaPredicted RBP10.87□□□□□ -0.67
SMPD4-218ENST00000482171 SMIM30A4D0T7 59 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 RNGTTO60942 597 aaKnown RBP10.87□□□□□ -0.67
SMPD4-218ENST00000482171 RPS17P08708 135 aaKnown RBP10.87□□□□□ -0.67
SMPD4-218ENST00000482171 C1GALT1C1LP0DN25 315 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 PTNP21246 168 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 OR1E2P47887 323 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 CD47Q08722 323 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 TMEM31Q5JXX7 168 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 CATSPEREQ5SY80 951 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 UBE2UQ5VVX9 321 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 CEACAM20Q6UY09 585 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 CLECL1Q8IZS7 167 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 TMEM102Q8N9M5 508 aaPredicted RBP10.87□□□□□ -0.67
SMPD4-218ENST00000482171 OR5AR1Q8NGP9 310 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 NFKBIDQ8NI38 313 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 TSACCQ96A04 125 aaPredicted RBP10.87□□□□□ -0.67
SMPD4-218ENST00000482171 RBM18Q96H35 190 aaKnown RBP10.87□□□□□ -0.67
SMPD4-218ENST00000482171 TTYH2Q9BSA4 534 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 C1QTNF1Q9BXJ1 281 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 ACSL6Q9UKU0 697 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 N6AMT1Q9Y5N5 214 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 PIAS3Q9Y6X2 628 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 BMP7P18075 431 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 PGDP52209 483 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 MVKQ03426 396 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 ABHD18Q0P651 414 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 TEAD4Q15561 434 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 TBRG1Q3YBR2 411 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 MZT2AQ6P582 158 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 ZNF730Q6ZMV8 503 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 MACC1Q6ZN28 852 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 CARM1Q86X55 608 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 MINDY1Q8N5J2 469 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 TMEM203Q969S6 136 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 IL4I1Q96RQ9 567 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 FAM118AQ9NWS6 357 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 CMTM6Q9NX76 183 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 PAQR5Q9NXK6 330 aaPredicted RBP10.87□□□□□ -0.67
SMPD4-218ENST00000482171 C5AR2Q9P296 337 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 UTS2RQ9UKP6 389 aa10.87□□□□□ -0.67
SMPD4-218ENST00000482171 OR52A4PA6NMU1 304 aa10.86□□□□□ -0.67
SMPD4-218ENST00000482171 FUCA1P04066 466 aa10.86□□□□□ -0.67
SMPD4-218ENST00000482171 LAMP2P13473 410 aa10.86□□□□□ -0.67
SMPD4-218ENST00000482171 RPL4P36578 427 aaKnown RBP10.86□□□□□ -0.67
SMPD4-218ENST00000482171 PRR5P85299 388 aa10.86□□□□□ -0.67
SMPD4-218ENST00000482171 ZNF763Q0D2J5 394 aa10.86□□□□□ -0.67
SMPD4-218ENST00000482171 ZNF155Q12901 538 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-218ENST00000482171 KCNJ8Q15842 424 aa10.86□□□□□ -0.67
SMPD4-218ENST00000482171 UAP1L1Q3KQV9 507 aa10.86□□□□□ -0.67
SMPD4-218ENST00000482171 C5orf22Q49AR2 442 aa10.86□□□□□ -0.67
SMPD4-218ENST00000482171 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.86□□□□□ -0.67
SMPD4-218ENST00000482171 FAM20CQ8IXL6 584 aa10.86□□□□□ -0.67
SMPD4-218ENST00000482171 ZNF671Q8TAW3 534 aa10.86□□□□□ -0.67
SMPD4-218ENST00000482171 TBC1D15Q8TC07 691 aa10.86□□□□□ -0.67
SMPD4-218ENST00000482171 IPCEF1Q8WWN9 437 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-218ENST00000482171 SH3YL1Q96HL8 342 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-218ENST00000482171 EGLN2Q96KS0 407 aa10.86□□□□□ -0.67
SMPD4-218ENST00000482171 SAMD11Q96NU1 681 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms