RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CLDN16Q9Y5I7 305 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 GTF3C1Q12789 2109 aa17.33■□□□□ 0.37
CLK1-211ENST00000481641 B3GALT2O43825 422 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 CCNT2O60583 730 aaKnown RBP17.33■□□□□ 0.36
CLK1-211ENST00000481641 CLEC3AO75596 197 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 STK16O75716 305 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 EPORP19235 508 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 CERS1P27544 350 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 CYB561P49447 251 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 RAB38P57729 211 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 ATP6V0D1P61421 351 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 HSF1Q00613 529 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 DLG1Q12959 904 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 ZKSCAN8Q15776 578 aaPredicted RBP17.33■□□□□ 0.36
CLK1-211ENST00000481641 CMC1Q7Z7K0 106 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 SIAH3Q8IW03 269 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 SLC34A3Q8N130 599 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 TCAIMQ8N3R3 496 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 CPSF7Q8N684 471 aaKnown RBP17.33■□□□□ 0.36
CLK1-211ENST00000481641 PPM1NQ8N819 430 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 SREK1Q8WXA9 508 aaKnown RBP17.33■□□□□ 0.36
CLK1-211ENST00000481641 F2RL3Q96RI0 385 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 CSF3RQ99062 836 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 NPLQ9BXD5 320 aaPredicted RBP17.33■□□□□ 0.36
CLK1-211ENST00000481641 CAPS2Q9BXY5 557 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 REXO4Q9GZR2 422 aaKnown RBP17.33■□□□□ 0.36
CLK1-211ENST00000481641 PTBP2Q9UKA9 531 aaKnown RBP17.33■□□□□ 0.36
CLK1-211ENST00000481641 FBXW2Q9UKT8 454 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 RNF112Q9ULX5 631 aa17.33■□□□□ 0.36
CLK1-211ENST00000481641 PRKNO60260 465 aaPredicted RBP17.32■□□□□ 0.36
CLK1-211ENST00000481641 NME2P1O60361 137 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 SH3BGRLO75368 114 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 NME2P22392 152 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 HLCSP50747 726 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 RAB10P61026 200 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 ADORA2A-AS1P86434 159 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 SLC13A2Q13183 592 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 EFTUD2Q15029 972 aaKnown RBP eCLIP17.32■□□□□ 0.36
CLK1-211ENST00000481641 PDK4Q16654 411 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.32■□□□□ 0.367e-11■■□□□ 12.3
CLK1-211ENST00000481641 ADPRMQ3LIE5 342 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 KBTBD12Q3ZCT8 623 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 KRTCAP3Q53RY4 240 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 ABHD17CQ6PCB6 329 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 C16orf47Q6ZP98 133 aaPredicted RBP17.32■□□□□ 0.36
CLK1-211ENST00000481641 NCCRP1Q6ZVX7 275 aaPredicted RBP17.32■□□□□ 0.36
CLK1-211ENST00000481641 CYS1Q717R9 158 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 SRRM1Q8IYB3 904 aaKnown RBP17.32■□□□□ 0.36
CLK1-211ENST00000481641 PDPRQ8NCN5 879 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 B3GNT7Q8NFL0 401 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 OR2L5Q8NG80 312 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 FBXO25Q8TCJ0 367 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 NCLNQ969V3 563 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 KIAA1191Q96A73 305 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 MAGED4Q96JG8 741 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 UBXN10Q96LJ8 280 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 ALG9Q9H6U8 611 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 CNOT10Q9H9A5 744 aaKnown RBP17.32■□□□□ 0.36
CLK1-211ENST00000481641 LIN28AQ9H9Z2 209 aaKnown RBP17.32■□□□□ 0.36
CLK1-211ENST00000481641 ZNF835Q9Y2P0 537 aa17.32■□□□□ 0.36
CLK1-211ENST00000481641 HNRNPRO43390 633 aaKnown RBP17.31■□□□□ 0.36
CLK1-211ENST00000481641 ASNA1O43681 348 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 CASQ1P31415 396 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 TRHRP34981 398 aaPredicted RBP17.31■□□□□ 0.36
CLK1-211ENST00000481641 SPRP35270 261 aaPredicted RBP17.31■□□□□ 0.36
CLK1-211ENST00000481641 RFC3P40938 356 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 CLCN2P51788 898 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 CASP6P55212 293 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 LIM2P55344 173 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 ILF2Q12905 390 aaKnown RBP17.31■□□□□ 0.36
CLK1-211ENST00000481641 CHIT1Q13231 466 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 ART3Q13508 389 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 SLMAPQ14BN4 828 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 CDKL4Q5MAI5 379 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 GRTP1Q5TC63 336 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 TRIM40Q6P9F5 258 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 ZDHHC24Q6UX98 284 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 UBE3DQ7Z6J8 389 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 TICAM1Q8IUC6 712 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 SPPL2CQ8IUH8 684 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 FAM98AQ8NCA5 519 aaKnown RBP17.31■□□□□ 0.36
CLK1-211ENST00000481641 FBF1Q8TES7 1133 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 WDR34Q96EX3 536 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 PTCD3Q96EY7 689 aaKnown RBP17.31■□□□□ 0.36
CLK1-211ENST00000481641 SERINC2Q96SA4 455 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 PITHD1Q9GZP4 211 aaPredicted RBP17.31■□□□□ 0.36
CLK1-211ENST00000481641 EHD1Q9H4M9 534 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 TRIM45Q9H8W5 580 aaPredicted RBP17.31■□□□□ 0.36
CLK1-211ENST00000481641 PRDM7Q9NQW5 492 aa17.31■□□□□ 0.36
CLK1-211ENST00000481641 ABCA12Q86UK0 2595 aa17.3■□□□□ 0.36
CLK1-211ENST00000481641 CYR61O00622 381 aa17.3■□□□□ 0.36
CLK1-211ENST00000481641 CLDN4O14493 209 aa17.3■□□□□ 0.36
CLK1-211ENST00000481641 FCHO1O14526 889 aa17.3■□□□□ 0.36
CLK1-211ENST00000481641 S100BP04271 92 aaPredicted RBP17.3■□□□□ 0.36
CLK1-211ENST00000481641 GSTA2P09210 222 aa17.3■□□□□ 0.36
CLK1-211ENST00000481641 SLC35E2BP0CK96 405 aa17.3■□□□□ 0.36
CLK1-211ENST00000481641 ESRRAP11474 423 aaPredicted RBP17.3■□□□□ 0.36
CLK1-211ENST00000481641 ZNF24P17028 368 aa17.3■□□□□ 0.36
CLK1-211ENST00000481641 TFEBP19484 476 aa17.3■□□□□ 0.36
CLK1-211ENST00000481641 GSTM2P28161 218 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms