RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 APOC1P02654 83 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 SLC6A1P30531 599 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 AVPR1BP47901 424 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 MEOX2P50222 304 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 COX10Q12887 443 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 LRIF1Q5T3J3 769 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 SULF1Q8IWU6 871 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 OR4N4Q8N0Y3 316 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 PIAS4Q8N2W9 510 aaPredicted RBP20.38■□□□□ 0.85
SDF4-206ENST00000478938 OR9Q2Q8NGE9 314 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 PPP3R2Q96LZ3 170 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 IL4I1Q96RQ9 567 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 NUDT15Q9NV35 164 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 PTTG3PQ9NZH4 202 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 GABRDO14764 452 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 KLK8O60259 260 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 LPLP06858 475 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 TNFRSF1BP20333 461 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 UBA1P22314 1058 aaKnown RBP20.38■□□□□ 0.85
SDF4-206ENST00000478938 DCDC1P59894 354 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 PPP3R1P63098 170 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 NHLRC3Q5JS37 347 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 ZNF730Q6ZMV8 503 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 PTCHD4Q6ZW05 846 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 CBLL1Q75N03 491 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 NELL2Q99435 816 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 GPR21Q99679 349 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 FDXACB1Q9BRP7 624 aaPredicted RBP20.38■□□□□ 0.85
SDF4-206ENST00000478938 COLEC11Q9BWP8 271 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 ARHGAP39Q9C0H5 1083 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 SLC39A8Q9C0K1 460 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 PITHD1Q9GZP4 211 aaPredicted RBP20.38■□□□□ 0.85
SDF4-206ENST00000478938 HDHD2Q9H0R4 259 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 ABCG8Q9H221 673 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 KCNH6Q9H252 994 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 POPDC3Q9HBV1 291 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 TRPM5Q9NZQ8 1165 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 DPP7Q9UHL4 492 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 MGAT4BQ9UQ53 548 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 CD86P42081 329 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 VMACQ2NL98 169 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 CDKL4Q5MAI5 379 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 RGS7BPQ6MZT1 257 aaPredicted RBP20.37■□□□□ 0.85
SDF4-206ENST00000478938 CCDC36Q8IYA8 594 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 BMPERQ8N8U9 685 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 HASPINQ8TF76 798 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 EDEM1Q92611 657 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 TCF25Q9BQ70 676 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 DPH7Q9BTV6 452 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 PRR14Q9BWN1 585 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 TMEM39BQ9GZU3 492 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 OR51J1Q9H342 316 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 NT5DC2Q9H857 520 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 ACTR10Q9NZ32 417 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 SSC5DA1L4H1 1573 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 GLYATL1P3A0A0U1RQE8 302 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 SGK494L7N484 410 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 OR7A17O14581 309 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 ENTPD6O75354 484 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 APOC3P02656 99 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 POU3F2P20265 443 aaPredicted RBP20.37■□□□□ 0.85
SDF4-206ENST00000478938 AQP1P29972 269 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 PBX3P40426 434 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 AIF1P55008 147 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 ITKQ08881 620 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 IHHQ14623 411 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 FAM187BQ17R55 369 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 PLA1AQ53H76 456 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 CDH26Q8IXH8 852 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 GPR65Q8IYL9 337 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 FTMTQ8N4E7 242 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 HGDQ93099 445 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 SCMH1Q96GD3 660 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 WDCPQ9H6R7 721 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 CLN6Q9NWW5 311 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 POFUT2Q9Y2G5 429 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 ARL5AQ9Y689 179 aa20.37■□□□□ 0.85
SDF4-206ENST00000478938 C7orf66A4D0T2 115 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 KLRG2A4D1S0 409 aaPredicted RBP20.36■□□□□ 0.85
SDF4-206ENST00000478938 LANCL1O43813 399 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 LALBAP00709 142 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 CENPAP49450 140 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 ABRQ12979 859 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 CORO6Q6QEF8 472 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 GOLGA7Q7Z5G4 137 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 TSEN54Q7Z6J9 526 aaKnown RBP20.36■□□□□ 0.85
SDF4-206ENST00000478938 GPSM1Q86YR5 675 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 SAMD14Q8IZD0 417 aaPredicted RBP20.36■□□□□ 0.85
SDF4-206ENST00000478938 GTPBP3Q969Y2 492 aaKnown RBP20.36■□□□□ 0.85
SDF4-206ENST00000478938 ULBP1Q9BZM6 244 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 LDB2O43679 373 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 HOXB9P17482 250 aaPredicted RBP20.36■□□□□ 0.85
SDF4-206ENST00000478938 RHCEP18577 417 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 KCNJ10P78508 379 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 PTGES3Q15185 160 aaKnown RBP20.36■□□□□ 0.85
SDF4-206ENST00000478938 GPR33Q49SQ1 333 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 LGI4Q8N135 537 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 CARNMT1Q8N4J0 409 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 FAM126AQ9BYI3 521 aaPredicted RBP20.36■□□□□ 0.85
SDF4-206ENST00000478938 TINAGL1Q9GZM7 467 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms