RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 MID2Q9UJV3 735 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 A0A088AWK7 358 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 IGHV3-20A0A0C4DH32 117 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 A6NL46 340 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 AGPSO00116 658 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 PSMD12O00232 456 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-222ENST00000478095 PLPP1O14494 284 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 UBFD1O14562 309 aaKnown RBP9.68□□□□□ -0.86
HDAC6-222ENST00000478095 ATXN7O15265 892 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-222ENST00000478095 B3GALT2O43825 422 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 TYROBPO43914 113 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 MLYCDO95822 493 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 FHP07954 510 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 MYZAPP0CAP1 466 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 C8orf89P0DMQ9 161 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 RNH1P13489 461 aaKnown RBP9.68□□□□□ -0.86
HDAC6-222ENST00000478095 ACPPP15309 386 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 ZNF10P21506 573 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-222ENST00000478095 ATP5A1P25705 553 aaKnown RBP9.68□□□□□ -0.86
HDAC6-222ENST00000478095 ALDH3A1P30838 453 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 PIK3CBP42338 1070 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 HTR6P50406 440 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 CCL11P51671 97 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 MTTPP55157 894 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 DNAJB13P59910 316 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 TGM3Q08188 693 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 KCNAB2Q13303 367 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 CASP8Q14790 479 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 TMEM35AQ53FP2 167 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 DCAF10Q5QP82 559 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 DEPDC1Q5TB30 811 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 LIPMQ5VYY2 423 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 FRMD7Q6ZUT3 714 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 AMER2Q8N7J2 671 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 MYRIPQ8NFW9 859 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 OR11G2Q8NGC1 345 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 AGAP11Q8TF27 550 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 SELENOMQ8WWX9 145 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 TSLPQ969D9 159 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 PGM2Q96G03 612 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 KCNC2Q96PR1 638 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 OR1F2PQ96R84 312 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 SERINC2Q96SA4 455 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 CSF3RQ99062 836 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 MID1IP1Q9NPA3 183 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 PRDM7Q9NQW5 492 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 SENP1Q9P0U3 644 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 SNX6Q9UNH7 406 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 TSC22D4Q9Y3Q8 395 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 TIMM22Q9Y584 194 aa9.68□□□□□ -0.86
HDAC6-222ENST00000478095 FER1L5A0AVI2 2057 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 FOXE1O00358 373 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-222ENST00000478095 MANBAO00462 879 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 EEDO75530 441 aaKnown RBP9.67□□□□□ -0.86
HDAC6-222ENST00000478095 PDYNP01213 254 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 IGHEP01854 428 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 GBAP04062 536 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 PRB1P04280 392 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 COX6A1P12074 109 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 NR1D1P20393 614 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 MAOAP21397 527 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 HIST1H1TP22492 207 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-222ENST00000478095 JAK1P23458 1154 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 PTX3P26022 381 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-222ENST00000478095 HMOX2P30519 316 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 HNRNPFP52597 415 aaKnown RBP9.67□□□□□ -0.86
HDAC6-222ENST00000478095 FOXA1P55317 472 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 LIM2P55344 173 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 PKNOX1P55347 436 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 RAB38P57729 211 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 BTG2P78543 158 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 RHAGQ02094 409 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 ABRAXAS2Q15018 415 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 AP5B1Q2VPB7 878 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 TUBB8Q3ZCM7 444 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 SOWAHCQ53LP3 525 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-222ENST00000478095 TNFAIP8L3Q5GJ75 292 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 OR4C11Q6IEV9 310 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 SCIMPQ6UWF3 145 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 ZCCHC23Q6ZST2 131 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 MED25Q71SY5 747 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 CROCCP2Q86T23 111 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 APLFQ8IW19 511 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-222ENST00000478095 ACOT4Q8N9L9 421 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 TMEM102Q8N9M5 508 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-222ENST00000478095 CLEC1AQ8NC01 280 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 TMEM52Q8NDY8 209 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 SRFBP1Q8NEF9 429 aaKnown RBP9.67□□□□□ -0.86
HDAC6-222ENST00000478095 METTL6Q8TCB7 284 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 METTL21AQ8WXB1 218 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 RGMAQ96B86 450 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 PKNOX2Q96KN3 472 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 MAGEB10Q96LZ2 347 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-222ENST00000478095 FER1L6-AS2Q96M78 137 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 IP6K3Q96PC2 410 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 MAPKAP1Q9BPZ7 522 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 CENPKQ9BS16 269 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 TBCDQ9BTW9 1192 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 GATA5Q9BWX5 397 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-222ENST00000478095 MRPL1Q9BYD6 325 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms