RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ADNP2Q6IQ32 1131 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 SLC25A25Q6KCM7 469 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 RAPH1Q70E73 1250 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 CMC1Q7Z7K0 106 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 FJX1Q86VR8 437 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 SCUBE1Q8IWY4 988 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 ZNF595Q8IYB9 648 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 HORMAD2Q8N7B1 307 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 SNX31Q8N9S9 440 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 APCDD1LQ8NCL9 501 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 TMEM52Q8NDY8 209 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 OR2L5Q8NG80 312 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 ATOH8Q96SQ7 321 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 LRRC1Q9BTT6 524 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 HES7Q9BYE0 225 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 ALG9Q9H6U8 611 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 PRDM7Q9NQW5 492 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 KLHL1Q9NR64 748 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 IGSF5Q9NSI5 407 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 ZDHHC18Q9NUE0 388 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 LRFN1Q9P244 771 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 SEC14L3Q9UDX4 400 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 PPIEQ9UNP9 301 aaKnown RBP10.1□□□□□ -0.79
SEC13-214ENST00000476597 ASB1Q9Y576 335 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 SCN3AQ9NY46 2000 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 MYO9AB2RTY4 2548 aa10.1□□□□□ -0.79
SEC13-214ENST00000476597 SVILO95425 2214 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 ESYT3A0FGR9 886 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 HMX2A2RU54 273 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 TGFBR3LH3BV60 316 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 CYR61O00622 381 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 ZG16O60844 167 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 CTNSO60931 367 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 KERAO60938 352 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 S100BP04271 92 aaPredicted RBP10.09□□□□□ -0.79
SEC13-214ENST00000476597 LTA4HP09960 611 aaKnown RBP10.09□□□□□ -0.79
SEC13-214ENST00000476597 TPP2P29144 1249 aaPredicted RBP10.09□□□□□ -0.79
SEC13-214ENST00000476597 EEF1DP29692 281 aaKnown RBP10.09□□□□□ -0.79
SEC13-214ENST00000476597 DCTP40126 519 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 HLCSP50747 726 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 HNRNPFP52597 415 aaKnown RBP10.09□□□□□ -0.79
SEC13-214ENST00000476597 MTTPP55157 894 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 LIM2P55344 173 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 PMP22Q01453 160 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 SLC7A5Q01650 507 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 OC90Q02509 493 aaPredicted RBP10.09□□□□□ -0.79
SEC13-214ENST00000476597 IRF8Q02556 426 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 SLMAPQ14BN4 828 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 TERF2Q15554 542 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.09□□□□□ -0.79
SEC13-214ENST00000476597 KRTCAP3Q53RY4 240 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 PAGE2BQ5JRK9 111 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 ZNF787Q6DD87 383 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 TRIM40Q6P9F5 258 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 LRRC70Q7Z2Q7 622 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 GALNTL5Q7Z4T8 443 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 UBE3DQ7Z6J8 389 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 TBC1D1Q86TI0 1168 aaPredicted RBP10.09□□□□□ -0.79
SEC13-214ENST00000476597 ZNF227Q86WZ6 799 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 LAS2Q8IYD9 372 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 TMEM178AQ8NBL3 297 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 RHEBL1Q8TAI7 183 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 ADAMTS18Q8TE60 1221 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 ZNF473Q8WTR7 871 aaKnown RBP10.09□□□□□ -0.79
SEC13-214ENST00000476597 NXNL1Q96CM4 212 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 F2RL3Q96RI0 385 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 SERINC2Q96SA4 455 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 DEFB126Q9BYW3 111 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 PRTFDC1Q9NRG1 225 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 NUDT4Q9NZJ9 180 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 KCMF1Q9P0J7 381 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 DAPP1Q9UN19 280 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 MRPS33Q9Y291 106 aaKnown RBP10.09□□□□□ -0.79
SEC13-214ENST00000476597 ACOT9Q9Y305 439 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 CSMD1Q96PZ7 3565 aa10.09□□□□□ -0.79
SEC13-214ENST00000476597 CCDC189A1A4V9 331 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 K7EPI3 171 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 C2P06681 752 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 MTHFD2P13995 350 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 CERS1P27544 350 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 MSH2P43246 934 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 CYB561P49447 251 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 CLCN2P51788 898 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 CKAP4Q07065 602 aaKnown RBP10.08□□□□□ -0.8
SEC13-214ENST00000476597 TGM3Q08188 693 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 SLC13A2Q13183 592 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 RCN2Q14257 317 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 EFTUD2Q15029 972 aaKnown RBP eCLIP10.08□□□□□ -0.85e-13■■■□□ 14.6
SEC13-214ENST00000476597 MROH9Q5TGP6 573 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 CCDC91Q7Z6B0 441 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.08□□□□□ -0.8
SEC13-214ENST00000476597 CENPLQ8N0S6 344 aaPredicted RBP10.08□□□□□ -0.8
SEC13-214ENST00000476597 SRFBP1Q8NEF9 429 aaKnown RBP10.08□□□□□ -0.8
SEC13-214ENST00000476597 B3GNT7Q8NFL0 401 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 THAP3Q8WTV1 239 aaPredicted RBP10.08□□□□□ -0.8
SEC13-214ENST00000476597 UBTD2Q8WUN7 234 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 KCTD4Q8WVF5 259 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 EXT2Q93063 718 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 UBE2E3Q969T4 207 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 GPR137Q96N19 417 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms