RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	PTPN23	Q9H3S7	1636 aa		2.99	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ABCC5	O15440	1437 aa		2.99	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SAMD9	Q5K651	1589 aa		2.99	□□□□□ -1.93
TMEM50B-208	ENST00000474272	BRD4	O60885	1362 aa	Predicted RBP	2.99	□□□□□ -1.93
TMEM50B-208	ENST00000474272	EPRS	P07814	1512 aa	Known RBP	2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	KIAA0586	Q9BVV6	1533 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	NPHP3	Q7Z494	1330 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ADAMTS9	Q9P2N4	1935 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	LRRD1	A4D1F6	860 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ZNF732	B4DXR9	585 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272		G3V2L1	256 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SURF4	O15260	269 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	MAGEB2	O15479	319 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	LRCH4	O75427	683 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	DUS4L	O95620	317 aa	Known RBP	2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ZSCAN5DP	P0CG00	497 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	TYMP	P19971	482 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	OAS2	P29728	719 aa	Known RBP	2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	BTG1	P62324	171 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ABR	Q12979	859 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	GRB14	Q14449	540 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	FAM106A	Q4KMX7	169 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	AGAP6	Q5VW22	663 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	PRAMEF8	Q5VWM4	474 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	CES4A	Q5XG92	561 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	C17orf107	Q6ZR85	190 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	C15orf52	Q6ZUT6	534 aa	Known RBP	2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	TRMT11	Q7Z4G4	463 aa	Known RBP	2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	DND1	Q8IYX4	353 aa	Known RBP	2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ZNF614	Q8N883	585 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	OR5T2	Q8NGG2	359 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ZNF519	Q8TB69	540 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	CD99L2	Q8TCZ2	262 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	BCL2L2	Q92843	193 aa	Predicted RBP	2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	RFT1	Q96AA3	541 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	OMA1	Q96E52	524 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	CDKN2AIPNL	Q96HQ2	116 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	EPSTI1	Q96J88	318 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	LURAP1	Q96LR2	239 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	KRT12	Q99456	494 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SYT15	Q9BQS2	421 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	OVOL2	Q9BRP0	275 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	NACAP1	Q9BZK3	213 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SLC5A7	Q9GZV3	580 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	HOXD1	Q9GZZ0	328 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	CUEDC2	Q9H467	287 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	PCF11	O94913	1555 aa	Known RBP	2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	PRDM2	Q13029	1718 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	LRPPRC	P42704	1394 aa	Known RBP	2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	DHX29	Q7Z478	1369 aa	Known RBP	2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	KIF15	Q9NS87	1388 aa		2.98	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SPATA31D1	Q6ZQQ2	1576 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	DAPK1	P53355	1430 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	C13orf42	A0A1B0GVH6	325 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272		A0A1W2PRV1	198 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	MEX3A	A1L020	520 aa	Known RBP	2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	NPIPB9	F8W1W9	429 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	TLX2	O43763	284 aa	Predicted RBP	2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	RAD51D	O75771	328 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	CEACAM4	O75871	244 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	LETM1	O95202	739 aa	Predicted RBP	2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SBK2	P0C263	348 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	MYOG	P15173	224 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SELE	P16581	610 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	VCL	P18206	1134 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SHC1	P29353	583 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ANP32A	P39687	249 aa	Known RBP	2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	TSFM	P43897	325 aa	Known RBP	2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	KHK	P50053	298 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	NME5	P56597	212 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SLC8A3	P57103	927 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	LASP1	Q14847	261 aa	Known RBP	2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	MORF4L2	Q15014	288 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ACKR1	Q16570	336 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	LRRC37A5P	Q49AS3	106 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SPANXN4	Q5MJ08	99 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	LRRC38	Q5VT99	294 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SLC27A4	Q6P1M0	643 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ZNF613	Q6PF04	617 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	KIF6	Q6ZMV9	814 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ASPG	Q86U10	573 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	LMNTD2	Q8IXW0	634 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SLC22A15	Q8IZD6	547 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	FBXL16	Q8N461	479 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SFRP1	Q8N474	314 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	C10orf53	Q8N6V4	93 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	TMEM99	Q8N816	258 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	C11orf45	Q8TAV5	145 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	RNASE8	Q8TDE3	154 aa	Known RBP	2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	SLCO2A1	Q92959	643 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	CNRIP1	Q96F85	164 aa	Predicted RBP	2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	NSMCE3	Q96MG7	304 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	USP28	Q96RU2	1077 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	PKP2	Q99959	881 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	TRIM51	Q9BSJ1	452 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	OSBPL8	Q9BZF1	889 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	FNDC4	Q9H6D8	234 aa	Predicted RBP	2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	PLCL2	Q9UPR0	1127 aa		2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	URB2	Q14146	1524 aa	Known RBP	2.97	□□□□□ -1.93
TMEM50B-208	ENST00000474272	ANKRD30A	Q9BXX3	1397 aa		2.97	□□□□□ -1.93

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