RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 MAGEC1O60732 1142 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 USO1O60763 962 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF354AO60765 605 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF217O75362 1048 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 AKAP3O75969 853 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 RTN3O95197 1032 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 LCA5LO95447 670 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 H1F0P07305 194 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 THEGLP0DJG4 465 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 ACTN1P12814 892 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 H2AFXP16104 143 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 TNFAIP3P21580 790 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 ADSSP30520 456 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 HNRNPH3P31942 346 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 PBX3P40426 434 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 OPRL1P41146 370 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 PSMC4P43686 418 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 MTIF2P46199 727 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 NLRP11P59045 1033 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 MRPS34P82930 218 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 PRKCEQ02156 737 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 CNTN2Q02246 1040 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 SP4Q02446 784 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 LRRC63Q05C16 580 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 SPAG1Q07617 926 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 FCHO2Q0JRZ9 810 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 TMEM115Q12893 351 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 PRKAA1Q13131 559 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 PPIL2Q13356 520 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 BAATQ14032 418 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 FRG1Q14331 258 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 PDIA5Q14554 519 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 TBCEQ15813 527 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 TPD52L1Q16890 204 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 KCTD19Q17RG1 926 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 ASTE1Q2TB18 679 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 FILIP1LQ4L180 1135 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 DCAF10Q5QP82 559 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 LRIF1Q5T3J3 769 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC70Q6NSX1 233 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 CDC73Q6P1J9 531 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 KLC3Q6P597 504 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 INO80CQ6PI98 192 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 Q6ZRP5 223 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 NIPA1Q7RTP0 329 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 MIER3Q7Z3K6 550 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF571Q7Z3V5 609 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 PTAR1Q7Z6K3 402 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF554Q86TJ5 538 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 PIGZQ86VD9 579 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 FBXO16Q8IX29 292 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC65Q8IXS2 484 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 FAM133AQ8N9E0 248 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 PCYOX1LQ8NBM8 494 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 NOA1Q8NC60 698 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 NAXEQ8NCW5 288 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 OR10G8Q8NGN5 311 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 RHOXF1Q8NHV9 184 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 GSDMBQ8TAX9 411 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 NPRL2Q8WTW4 380 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 CHURC1Q8WUH1 139 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 SLC35C1Q96A29 364 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC51Q96ER9 411 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 MMABQ96EY8 250 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC34Q96HJ3 373 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 DHTKD1Q96HY7 919 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 EGLN2Q96KS0 407 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 FAM20AQ96MK3 541 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 WDFY2Q96P53 400 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 NAP1L4Q99733 375 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 PIP5K1AQ99755 562 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 CTRCQ99895 268 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 CBWD1Q9BRT8 395 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 CRACR2AQ9BSW2 395 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 CARD6Q9BX69 1037 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 TEX13BQ9BXU2 312 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 YTHDF1Q9BYJ9 559 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 RAB34Q9BZG1 259 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 NT5C3AQ9H0P0 336 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 GLT8D2Q9H1C3 349 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 PORCNQ9H237 461 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 GOLPH3Q9H4A6 298 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 ZHX3Q9H4I2 956 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 HEXA-AS1Q9H8Q6 139 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 ANKZF1Q9H8Y5 726 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 POLR1BQ9H9Y6 1135 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 SCPEP1Q9HB40 452 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 PARVGQ9HBI0 331 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 EPB41L5Q9HCM4 733 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 MBNL1Q9NR56 388 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 AGPAT3Q9NRZ7 376 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 FAM207AQ9NSI2 230 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 AGPAT5Q9NUQ2 364 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 MIOSQ9NXC5 875 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 CYP39A1Q9NYL5 469 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 TAS2R10Q9NYW0 307 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 EHD2Q9NZN4 543 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 CWC15Q9P013 229 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 ADAM22Q9P0K1 906 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 GCNT4Q9P109 453 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms