RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 PITHD1Q9GZP4 211 aaPredicted RBP17.64■□□□□ 0.41
COMMD1-207ENST00000471704 CDC42EP4Q9H3Q1 356 aaKnown RBP17.64■□□□□ 0.41
COMMD1-207ENST00000471704 ACSS3Q9H6R3 686 aa17.64■□□□□ 0.41
COMMD1-207ENST00000471704 CLK4Q9HAZ1 481 aaKnown RBP17.64■□□□□ 0.41
COMMD1-207ENST00000471704 KCNK13Q9HB14 408 aa17.64■□□□□ 0.41
COMMD1-207ENST00000471704 NMRAL1Q9HBL8 299 aa17.64■□□□□ 0.41
COMMD1-207ENST00000471704 SNX15Q9NRS6 342 aa17.64■□□□□ 0.41
COMMD1-207ENST00000471704 SUPT3HB4E1H0 165 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 PRMT3O60678 531 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 SUPT3HO75486 399 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 WISP2O76076 250 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 UNC5CO95185 931 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 ALDOAP04075 364 aaKnown RBP17.63■□□□□ 0.41
COMMD1-207ENST00000471704 GSTM2P28161 218 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 SRSF11Q05519 484 aaKnown RBP17.63■□□□□ 0.41
COMMD1-207ENST00000471704 CHIT1Q13231 466 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 TUBA3CQ13748 450 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 ZNF766Q5HY98 468 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 TUBA3EQ6PEY2 450 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 LRRC70Q7Z2Q7 622 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 MDS2Q8NDY4 140 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 NFAM1Q8NET5 270 aaPredicted RBP17.63■□□□□ 0.41
COMMD1-207ENST00000471704 SEC16BQ96JE7 1060 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 GPR78Q96P69 363 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 SIGLEC12Q96PQ1 595 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 PRDM9Q9NQV7 894 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 ENTPD4Q9Y227 616 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 ACOT9Q9Y305 439 aa17.63■□□□□ 0.41
COMMD1-207ENST00000471704 A0A087X1B8 175 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 ANKDD1BA6NHY2 528 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 LRRC14BA6NHZ5 514 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 SAGE2PA6NJ88 616 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 S100BP04271 92 aaPredicted RBP17.62■□□□□ 0.41
COMMD1-207ENST00000471704 CD96P40200 585 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 CASP2P42575 452 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 PLA2G16P53816 162 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 ACTN3Q08043 901 aaPredicted RBP17.62■□□□□ 0.41
COMMD1-207ENST00000471704 TBCCQ15814 346 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 UAP1Q16222 522 aaPredicted RBP17.62■□□□□ 0.41
COMMD1-207ENST00000471704 MEP1AQ16819 746 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.62■□□□□ 0.41
COMMD1-207ENST00000471704 ABHD17CQ6PCB6 329 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 UBE3DQ7Z6J8 389 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 SCUBE1Q8IWY4 988 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 OR2L5Q8NG80 312 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 F2RL3Q96RI0 385 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 CSF3RQ99062 836 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 EFCAB11Q9BUY7 163 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 REXO4Q9GZR2 422 aaKnown RBP17.62■□□□□ 0.41
COMMD1-207ENST00000471704 PRDM7Q9NQW5 492 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 SEC14L3Q9UDX4 400 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 GTF3C1Q12789 2109 aa17.62■□□□□ 0.41
COMMD1-207ENST00000471704 K7EPI3 171 aa17.61■□□□□ 0.41
COMMD1-207ENST00000471704 ACSL3O95573 720 aa17.61■□□□□ 0.41
COMMD1-207ENST00000471704 CERS1P27544 350 aa17.61■□□□□ 0.41
COMMD1-207ENST00000471704 PMP22Q01453 160 aa17.61■□□□□ 0.41
COMMD1-207ENST00000471704 IRF8Q02556 426 aa17.61■□□□□ 0.41
COMMD1-207ENST00000471704 PCDH1Q08174 1060 aa17.61■□□□□ 0.41
COMMD1-207ENST00000471704 LGI4Q8N135 537 aa17.61■□□□□ 0.41
COMMD1-207ENST00000471704 PLD6Q8N2A8 252 aaKnown RBP17.61■□□□□ 0.41
COMMD1-207ENST00000471704 RHEBL1Q8TAI7 183 aa17.61■□□□□ 0.41
COMMD1-207ENST00000471704 ZNF473Q8WTR7 871 aaKnown RBP17.61■□□□□ 0.41
COMMD1-207ENST00000471704 SCMH1Q96GD3 660 aa17.61■□□□□ 0.41
COMMD1-207ENST00000471704 NPLQ9BXD5 320 aaPredicted RBP17.61■□□□□ 0.41
COMMD1-207ENST00000471704 HES7Q9BYE0 225 aa17.61■□□□□ 0.41
COMMD1-207ENST00000471704 ANKRD10Q9NXR5 420 aa17.61■□□□□ 0.41
COMMD1-207ENST00000471704 A0A096LPK6 155 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 A8MUA0 341 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 PSMD12O00232 456 aaPredicted RBP17.6■□□□□ 0.41
COMMD1-207ENST00000471704 KLK8O60259 260 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 KLHL2O95198 593 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 PPP2R1BP30154 601 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 PHBP35232 272 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 CA7P43166 264 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 MSH2P43246 934 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 MAGEA12P43365 314 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 RAB38P57729 211 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 ART3Q13508 389 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 LAPTM5Q13571 262 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 NAA30Q147X3 362 aaPredicted RBP17.6■□□□□ 0.41
COMMD1-207ENST00000471704 SETDB1Q15047 1291 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 SP5Q6BEB4 398 aaPredicted RBP17.6■□□□□ 0.41
COMMD1-207ENST00000471704 ZNF793Q6ZN11 406 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 LAS2Q8IYD9 372 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 CYP4X1Q8N118 509 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 RNF175Q8N4F7 328 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 FAM47BQ8NA70 645 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 SLC44A1Q8WWI5 657 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 ITLN2Q8WWU7 325 aaPredicted RBP17.6■□□□□ 0.41
COMMD1-207ENST00000471704 IFT81Q8WYA0 676 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 ISL2Q96A47 359 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 FAR2Q96K12 515 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 FMO2Q99518 471 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 UTP23Q9BRU9 249 aaKnown RBP17.6■□□□□ 0.41
COMMD1-207ENST00000471704 MS4A8Q9BY19 250 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 ZNF358Q9NW07 568 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 OPTCQ9UBM4 332 aa17.6■□□□□ 0.41
COMMD1-207ENST00000471704 MTRF1LQ9UGC7 380 aaKnown RBP17.6■□□□□ 0.41
COMMD1-207ENST00000471704 NCOA6Q14686 2063 aaPredicted RBP17.59■□□□□ 0.41
COMMD1-207ENST00000471704 ASPDHA6ND91 283 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms