RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 C19orf47Q8N9M1 422 aaKnown RBP8.92□□□□□ -0.98
VPS52-216ENST00000471309 FAM47BQ8NA70 645 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 CAMKVQ8NCB2 501 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 OR2T12Q8NG77 320 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 OR8K5Q8NH50 307 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 PYDC1Q8WXC3 89 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 RSRC1Q96IZ7 334 aaKnown RBP8.92□□□□□ -0.98
VPS52-216ENST00000471309 LRGUKQ96M69 825 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 FCRL4Q96PJ5 515 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 TRAPPC9Q96Q05 1148 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 ECSITQ9BQ95 431 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 THUMPD3Q9BV44 507 aaKnown RBP8.92□□□□□ -0.98
VPS52-216ENST00000471309 FAIM2Q9BWQ8 316 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 EPB41L1Q9H4G0 881 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 IKZF5Q9H5V7 419 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 COPS7BQ9H9Q2 264 aaPredicted RBP8.92□□□□□ -0.98
VPS52-216ENST00000471309 TMEM74BQ9NUR3 256 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 TEX10Q9NXF1 929 aaPredicted RBP8.92□□□□□ -0.98
VPS52-216ENST00000471309 TAS2R7Q9NYW3 318 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 ZNF282Q9UDV7 671 aaPredicted RBP8.92□□□□□ -0.98
VPS52-216ENST00000471309 VPS4AQ9UN37 437 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 CORO2BQ9UQ03 480 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 TECTAO75443 2155 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 A0A0G2JN53 185 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 A0A1B0GTQ1 180 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 RHPN2P1A8MT19 583 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 EVPLLA8MZ36 301 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 H0YGG7 62 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 YKT6O15498 198 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 ZSCAN9O15535 394 aaPredicted RBP8.91□□□□□ -0.98
VPS52-216ENST00000471309 HRO43593 1189 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 NUDT21O43809 227 aaKnown RBP8.91□□□□□ -0.98
VPS52-216ENST00000471309 CPSF4O95639 269 aaKnown RBP8.91□□□□□ -0.98
VPS52-216ENST00000471309 ZNF888P0CJ79 500 aaPredicted RBP8.91□□□□□ -0.98
VPS52-216ENST00000471309 SMIM10L1P0DMW3 83 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 ST6GAL1P15907 406 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 GPX2P18283 190 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 GGT1P19440 569 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 ZNF10P21506 573 aaPredicted RBP8.91□□□□□ -0.98
VPS52-216ENST00000471309 CDH3P22223 829 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 CERS1P27544 350 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 FRKP42685 505 aaPredicted RBP8.91□□□□□ -0.98
VPS52-216ENST00000471309 GZMMP51124 257 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 ATXN3P54252 364 aaPredicted RBP8.91□□□□□ -0.98
VPS52-216ENST00000471309 OR4D2P58180 307 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 RAB8AP61006 207 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 ARF3P61204 181 aaPredicted RBP8.91□□□□□ -0.98
VPS52-216ENST00000471309 ABHD18Q0P651 414 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 SLAMF1Q13291 335 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 GAB1Q13480 694 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 SUZ12Q15022 739 aaKnown RBP8.91□□□□□ -0.98
VPS52-216ENST00000471309 PRSS53Q2L4Q9 553 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 MPEG1Q2M385 716 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 MTX3Q5HYI7 312 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 ZC3H12BQ5HYM0 836 aaKnown RBP8.91□□□□□ -0.98
VPS52-216ENST00000471309 FRMPD2BQ6IN97 320 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 IRGCQ6NXR0 463 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 CYP2R1Q6VVX0 501 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 ABHD13Q7L211 337 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 KANSL1Q7Z3B3 1105 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 SERPINA11Q86U17 422 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 IFNEQ86WN2 208 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 PROSER1Q86XN7 944 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 SLC35F3Q8IY50 421 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 MMP21Q8N119 569 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 CARFQ8N187 725 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 TRIML2Q8N7C3 387 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 AMER3Q8N944 861 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 KCT2Q8NC54 265 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 OR4A15Q8NGL6 344 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 UTP15Q8TED0 518 aaKnown RBP8.91□□□□□ -0.98
VPS52-216ENST00000471309 CIDECQ96AQ7 238 aaPredicted RBP8.91□□□□□ -0.98
VPS52-216ENST00000471309 FAM120BQ96EK7 910 aaKnown RBP8.91□□□□□ -0.98
VPS52-216ENST00000471309 AURKBQ96GD4 344 aaPredicted RBP8.91□□□□□ -0.98
VPS52-216ENST00000471309 SMIM10Q96HG1 83 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 REXO5Q96IC2 774 aaKnown RBP8.91□□□□□ -0.98
VPS52-216ENST00000471309 ZNF583Q96ND8 569 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 SERINC2Q96SA4 455 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 CD180Q99467 661 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 MACROD1Q9BQ69 325 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 SPATA9Q9BWV2 254 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 NLNQ9BYT8 704 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 KLHL25Q9H0H3 589 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 NEUROD4Q9HD90 331 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 C1GALT1Q9NS00 363 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 TAS2R9Q9NYW1 312 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 NLGN3Q9NZ94 848 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 LRIT1Q9P2V4 623 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 EPHA6Q9UF33 1036 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 EGFL7Q9UHF1 273 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 RAPGEFL1Q9UHV5 662 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 PCDHGB4Q9UN71 923 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 ERVK-11Q9UQG0 969 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 ASB4Q9Y574 426 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 RNF215Q9Y6U7 377 aa8.91□□□□□ -0.98
VPS52-216ENST00000471309 SPAG17Q6Q759 2223 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 PCDH15Q96QU1 1955 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 LOC105369274A0A096LPK9 316 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 LOC102723532A0A0G2JNH3 316 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 A0A1W2PRB8 838 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms