RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 FURINP09958 794 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 FAM58BPP0C7Q3 252 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 CDK4P11802 303 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 DDCP20711 480 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 CAPN3P20807 821 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 S100A3P33764 101 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 TRPC1P48995 793 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 MAPK12P53778 367 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 PLA2G16P53816 162 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 VSX2P58304 361 aaPredicted RBP12.1□□□□□ -0.47
TRAF4-208ENST00000469529 SKP1P63208 163 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 PHC1P78364 1004 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 KLC1Q07866 573 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 ACTN3Q08043 901 aaPredicted RBP12.1□□□□□ -0.47
TRAF4-208ENST00000469529 FOXM1Q08050 763 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 GRM7Q14831 915 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 NDUFA9Q16795 377 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 UGT8Q16880 541 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 SPATS1Q496A3 300 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 VPS26BQ4G0F5 336 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 GLIPR1L2Q4G1C9 344 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 DNAL1Q4LDG9 190 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 ANXA8L1Q5VT79 327 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 TLDC1Q6P9B6 456 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 GLRX5Q86SX6 157 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 SLITRK4Q8IW52 837 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 ARHGAP24Q8N264 748 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 TMEM132CQ8N3T6 1108 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 KRTCAP2Q8N6L1 136 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 POU5F2Q8N7G0 328 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 RBM15BQ8NDT2 890 aaKnown RBP12.1□□□□□ -0.47
TRAF4-208ENST00000469529 KLHL29Q96CT2 875 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 MVB12AQ96EY5 273 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 C17orf62Q9BQA9 187 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 BHLHE41Q9C0J9 482 aaPredicted RBP12.1□□□□□ -0.47
TRAF4-208ENST00000469529 KLHL25Q9H0H3 589 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 ATAD3AQ9NVI7 634 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRAF4-208ENST00000469529 FAM120CQ9NX05 1096 aaKnown RBP12.1□□□□□ -0.47
TRAF4-208ENST00000469529 KCMF1Q9P0J7 381 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 FTSJ1Q9UET6 329 aa12.1□□□□□ -0.47
TRAF4-208ENST00000469529 ASPDHA6ND91 283 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 CFAP73A6NFT4 308 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 TMX2-CTNND1H3BSU7 103 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 RTCAO00442 366 aaKnown RBP12.09□□□□□ -0.47
TRAF4-208ENST00000469529 ANGPT2O15123 496 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 GYG2O15488 501 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 PROM1O43490 865 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 TMPRSS11DO60235 418 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 SH3BGRLO75368 114 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 ERN1O75460 977 aaKnown RBP12.09□□□□□ -0.47
TRAF4-208ENST00000469529 RASSF9O75901 435 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 HPCAL1P37235 193 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 MLLT3P42568 568 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-208ENST00000469529 FRKP42685 505 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-208ENST00000469529 SSR2P43308 183 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 KIR3DL1P43629 444 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 WNT3P56703 355 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 TAS2R50P59544 299 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 ACY1Q03154 408 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 C2orf80Q0P641 193 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 SLAMF1Q13291 335 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 HKDC1Q2TB90 917 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 FAM174BQ3ZCQ3 159 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 CPTPQ5TA50 214 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 C16orf89Q6UX73 402 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 RINLQ6ZS11 566 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 TMPRSS9Q7Z410 1059 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 PIP4P1Q86T03 277 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 GPR180Q86V85 440 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 RETREG3Q86VR2 466 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 NAXDQ8IW45 347 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 DSELQ8IZU8 1212 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 PGAM4Q8N0Y7 254 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 VPS37AQ8NEZ2 397 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 GOT1L1Q8NHS2 421 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-208ENST00000469529 GTF2H4Q92759 462 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 PHF12Q96QT6 1004 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 GFM1Q96RP9 751 aaKnown RBP12.09□□□□□ -0.47
TRAF4-208ENST00000469529 MACROD1Q9BQ69 325 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 GPATCH1Q9BRR8 931 aaKnown RBP12.09□□□□□ -0.47
TRAF4-208ENST00000469529 FAIM2Q9BWQ8 316 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 RMND5AQ9H871 391 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 GID8Q9NWU2 228 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 TMEM9Q9P0T7 183 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 BTNL2Q9UIR0 455 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 SERTAD3Q9UJW9 196 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 PCDHA9Q9Y5H5 950 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 HEATR5BQ9P2D3 2071 aa12.09□□□□□ -0.47
TRAF4-208ENST00000469529 COL5A1P20908 1838 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-208ENST00000469529 C1orf226A1L170 272 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 HYKKA2RU49 373 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 BLACEA4D250 179 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 C4orf51C9J302 202 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 D6RAR5 112 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 H0YIG0 161 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 NR5A2O00482 541 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 RNASET2O00584 256 aaKnown RBP12.08□□□□□ -0.48
TRAF4-208ENST00000469529 MRASO14807 208 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 AIM2O14862 343 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms