RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 TOXO94900 526 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 OR6B1O95007 311 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 TTC4O95801 387 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 SERPINA6P08185 405 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 CAPN3P20807 821 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 PLA2G16P53816 162 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 NUP107P57740 925 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 SKP1P63208 163 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 TFF3Q07654 80 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 GXYLT1Q4G148 440 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 SCUBE1Q8IWY4 988 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.41□□□□□ -0.58
HDAC3-204ENST00000469207 SLC35F6Q8N357 371 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 SPATA6LQ8N4H0 392 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 FAM47BQ8NA70 645 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 POGLUT1Q8NBL1 392 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 OR5M9Q8NGP3 310 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 LILRB4Q8NHJ6 448 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 ATL1Q8WXF7 558 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 ESAMQ96AP7 390 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 MS4A6EQ96DS6 147 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 PDLIM5Q96HC4 596 aaKnown RBP11.41□□□□□ -0.58
HDAC3-204ENST00000469207 OSBPL9Q96SU4 736 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 CSF3RQ99062 836 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 EGFL8Q99944 293 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 ASIC3Q9UHC3 531 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 ERVK-11Q9UQG0 969 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 LIPGQ9Y5X9 500 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 HCFC1P51610 2035 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 EML6Q6ZMW3 1958 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 ZNF407Q9C0G0 2248 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 LRIT2A6NDA9 550 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 URADA6NGE7 173 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 NCF1BA6NI72 391 aaPredicted RBP11.4□□□□□ -0.58
HDAC3-204ENST00000469207 NCF1CA8MVU1 366 aaPredicted RBP11.4□□□□□ -0.58
HDAC3-204ENST00000469207 CDK2AP1O14519 115 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 ERI3O43414 337 aaKnown RBP11.4□□□□□ -0.58
HDAC3-204ENST00000469207 PRAMEF4O60810 478 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 WDR47O94967 919 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 ENO2P09104 434 aaPredicted RBP11.4□□□□□ -0.58
HDAC3-204ENST00000469207 C1GALT1C1LP0DN25 315 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 NCF1P14598 390 aaPredicted RBP11.4□□□□□ -0.58
HDAC3-204ENST00000469207 IGFBP2P18065 325 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 SSR4P51571 173 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 PPIAP62937 165 aaKnown RBP11.4□□□□□ -0.58
HDAC3-204ENST00000469207 SLC13A2Q13183 592 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 SNTB1Q13884 538 aaKnown RBP11.4□□□□□ -0.58
HDAC3-204ENST00000469207 SLBPQ14493 270 aaKnown RBP eCLIP11.4□□□□□ -0.58
HDAC3-204ENST00000469207 PRAMEF9Q5VWM5 478 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 FAM45BPQ6NSW5 357 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 SPNS3Q6ZMD2 512 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 SLCO4C1Q6ZQN7 724 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 KIAA0408Q6ZU52 694 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 VN1R5Q7Z5H4 357 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 ANKMY2Q8IV38 441 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 KLHDC8AQ8IYD2 350 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 PSD4Q8NDX1 1056 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 ARMC2Q8NEN0 867 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 FAM45AQ8TCE6 357 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 ACTRT1Q8TDG2 376 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 GRK7Q8WTQ7 553 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 VMP1Q96GC9 406 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 SEC16BQ96JE7 1060 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 FAR2Q96K12 515 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 QRFPRQ96P65 431 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 PLSCR2Q9NRY7 297 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 PNPLA3Q9NST1 481 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 KCNE2Q9Y6J6 123 aa11.4□□□□□ -0.58
HDAC3-204ENST00000469207 SETD2Q9BYW2 2564 aaPredicted RBP11.4□□□□□ -0.58
HDAC3-204ENST00000469207 USP27XA6NNY8 438 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 CYR61O00622 381 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 TAPBPO15533 448 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 ZFAND5O76080 213 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 IFNA16P05015 189 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 ZNF37AP17032 561 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-204ENST00000469207 SOX3P41225 446 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 FNTAP49354 379 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 RAB38P57729 211 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 TAS2R39P59534 338 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 PLGLB1Q02325 96 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 ID2Q02363 134 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 BMPR2Q13873 1038 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 TSNQ15631 228 aaKnown RBP11.39□□□□□ -0.59
HDAC3-204ENST00000469207 TMEM211Q6ICI0 200 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 NIPAL1Q6NVV3 410 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 ZNF585AQ6P3V2 769 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 ARHGAP11AQ6P4F7 1023 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 TMIGD1Q6UXZ0 262 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 GALNT7Q86SF2 657 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 DMRTC2Q8IXT2 367 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-204ENST00000469207 OR2M7Q8NG81 312 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 DOK4Q8TEW6 326 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 PTPMT1Q8WUK0 201 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-204ENST00000469207 RND1Q92730 232 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 RHBDF1Q96CC6 855 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 TTTY12Q9BZ98 90 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 TP63Q9H3D4 680 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-204ENST00000469207 CLK4Q9HAZ1 481 aaKnown RBP11.39□□□□□ -0.59
HDAC3-204ENST00000469207 KCNJ16Q9NPI9 418 aa11.39□□□□□ -0.59
HDAC3-204ENST00000469207 TIMMDC1Q9NPL8 285 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms