RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 NCBP2-AS2Q69YL0 99 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.41□□□□□ -1.064e-8■□□□□ 10.8
HPS4-209ENST00000466781 KCTD9Q7L273 389 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 OSTF1Q92882 214 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 OR51I1Q9H343 314 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 ZIM2Q9NZV7 527 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 hCG_1807616A0A1W2PRN6 198 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 C11orf98E9PRG8 122 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 J3KR12 359 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 SCO2O43819 266 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 MERTKQ12866 999 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 NPTX1Q15818 432 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 FAM76BQ5HYJ3 339 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 MS4A13Q5J8X5 152 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 KIAA0895LQ68EN5 471 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 RNF111Q6ZNA4 994 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 OR4K14Q8NGD5 310 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 OR6N2Q8NGY6 317 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 KCNN1Q92952 543 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 C16orf58Q96GQ5 468 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 CDKN2AIPNLQ96HQ2 116 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 MAPKAP1Q9BPZ7 522 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 NUDT15Q9NV35 164 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 C2orf92A0A1B0GVN3 265 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 B8ZZF3 427 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 AXIN1O15169 862 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 IFNA2P01563 188 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 RHOP08100 348 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 IFI30P13284 250 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 CD36P16671 472 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 UBE2NP61088 152 aaKnown RBP8.4□□□□□ -1.06
HPS4-209ENST00000466781 GPR17Q13304 367 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 GRK1Q15835 563 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 SYPL2Q5VXT5 272 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 TMED4Q7Z7H5 227 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 SHKBP1Q8TBC3 707 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 TM9SF4Q92544 642 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 DMRTB1Q96MA1 342 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 GPR174Q9BXC1 333 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 SMOC2Q9H3U7 446 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 MEAF6Q9HAF1 191 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 MTMR10Q9NXD2 777 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 HEMK1Q9Y5R4 338 aaPredicted RBP8.4□□□□□ -1.06
HPS4-209ENST00000466781 ANKRD36CQ5JPF3 1778 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 FXYD6-FXYD2A0A087WZ82 144 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 OTOL1A6NHN0 477 aaPredicted RBP8.4□□□□□ -1.06
HPS4-209ENST00000466781 CCRL2O00421 344 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 RNGTTO60942 597 aaKnown RBP8.4□□□□□ -1.06
HPS4-209ENST00000466781 C6orf47O95873 294 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 KCNQ1P51787 676 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 IST1P53990 364 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 DEFA5Q01523 94 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 ROR2Q01974 943 aaKnown RBP8.4□□□□□ -1.06
HPS4-209ENST00000466781 DLX2Q07687 328 aaPredicted RBP8.4□□□□□ -1.06
HPS4-209ENST00000466781 SWT1Q5T5J6 900 aaKnown RBP8.4□□□□□ -1.06
HPS4-209ENST00000466781 TRAPPC6BQ86SZ2 158 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 ASPGQ86U10 573 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 ZNF461Q8TAF7 563 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 PHOSPHO2Q8TCD6 241 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 TRIM43Q96BQ3 446 aaPredicted RBP8.4□□□□□ -1.06
HPS4-209ENST00000466781 ZBED3Q96IU2 234 aaPredicted RBP8.4□□□□□ -1.06
HPS4-209ENST00000466781 WDR92Q96MX6 357 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 IL4I1Q96RQ9 567 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 PCYT2Q99447 389 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 TTYH3Q9C0H2 523 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 FXYD6Q9H0Q3 95 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 ADAMTS10Q9H324 1103 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 COQ10BQ9H8M1 238 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 MS4A12Q9NXJ0 267 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 DNAJB4Q9UDY4 337 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 LGALS13Q9UHV8 139 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 NUP50Q9UKX7 468 aa8.4□□□□□ -1.06
HPS4-209ENST00000466781 OR6C74A6NCV1 312 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 ENDOUP21128 410 aaKnown RBP8.4□□□□□ -1.07
HPS4-209ENST00000466781 SLC15A1P46059 708 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 FASLGP48023 281 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 GDF10P55107 478 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 ERN2Q76MJ5 926 aaKnown RBP8.4□□□□□ -1.07
HPS4-209ENST00000466781 TMEM130Q8N3G9 435 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 FAM156AQ8NDB6 213 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 CPT1CQ8TCG5 803 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 S100A16Q96FQ6 103 aaKnown RBP8.4□□□□□ -1.07
HPS4-209ENST00000466781 TMEM109Q9BVC6 243 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 FZD3Q9NPG1 666 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 GSKIPQ9P0R6 139 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 PCDHGB6Q9Y5F9 930 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 LOC730098B7Z3J9 87 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 BHMG1C9JSJ3 638 aaPredicted RBP8.4□□□□□ -1.07
HPS4-209ENST00000466781 HCRTR2O43614 444 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 P04436 131 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 OTX2P32243 289 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 PLGLAQ15195 96 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 DHCR24Q15392 516 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 UPP1Q16831 310 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 PLEKHG6Q3KR16 790 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 SLC39A4Q6P5W5 647 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 NCEH1Q6PIU2 408 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 DCAF4L2Q8NA75 395 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 STOML3Q8TAV4 291 aa8.4□□□□□ -1.07
HPS4-209ENST00000466781 PTCHD1Q96NR3 888 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms