RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ZNF160Q9HCG1 818 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 MID1IP1Q9NPA3 183 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 FBXW2Q9UKT8 454 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 WDR91A4D1P6 747 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 MANBAO00462 879 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 EEDO75530 441 aaKnown RBP10.98□□□□□ -0.65
CUX1-207ENST00000465461 PRKRAO75569 313 aaKnown RBP10.98□□□□□ -0.65
CUX1-207ENST00000465461 IGHEP01854 428 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 CELA2AP08217 269 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 C8orf89P0DMQ9 161 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 COX6A1P12074 109 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 ACPPP15309 386 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 ATP5A1P25705 553 aaKnown RBP10.98□□□□□ -0.65
CUX1-207ENST00000465461 PTX3P26022 381 aaPredicted RBP10.98□□□□□ -0.65
CUX1-207ENST00000465461 SERPINB3P29508 390 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 SSR2P43308 183 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 DNAJB13P59910 316 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 PHEXP78562 749 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 LCP2Q13094 533 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 IFT88Q13099 833 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 SLAMF1Q13291 335 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 MPP2Q14168 576 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 AP5B1Q2VPB7 878 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 TUBB8Q3ZCM7 444 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 GGTA1PQ4G0N0 100 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 TMEM35AQ53FP2 167 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 TNFAIP8L3Q5GJ75 292 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 CFAP157Q5JU67 520 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 LIPMQ5VYY2 423 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 ATG14Q6ZNE5 492 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 ZCCHC23Q6ZST2 131 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 MED25Q71SY5 747 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 ANKRD37Q7Z713 158 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 CLNKQ7Z7G1 428 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 APLFQ8IW19 511 aaPredicted RBP10.98□□□□□ -0.65
CUX1-207ENST00000465461 ACOT4Q8N9L9 421 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 TMEM102Q8N9M5 508 aaPredicted RBP10.98□□□□□ -0.65
CUX1-207ENST00000465461 FDCSPQ8NFU4 85 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 METTL6Q8TCB7 284 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 AGAP11Q8TF27 550 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 UCN3Q969E3 161 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 PKNOX2Q96KN3 472 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 KCNC2Q96PR1 638 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 ZNF382Q96SR6 550 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 TBCDQ9BTW9 1192 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 GATA5Q9BWX5 397 aaPredicted RBP10.98□□□□□ -0.65
CUX1-207ENST00000465461 ZNF717Q9BY31 904 aaPredicted RBP10.98□□□□□ -0.65
CUX1-207ENST00000465461 MLXIPLQ9NP71 852 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 NECTIN3Q9NQS3 549 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 TRPS1Q9UHF7 1281 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 ADGRE2Q9UHX3 823 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 TSC22D4Q9Y3Q8 395 aa10.98□□□□□ -0.65
CUX1-207ENST00000465461 TNRC6AQ8NDV7 1962 aaKnown RBP10.97□□□□□ -0.65
CUX1-207ENST00000465461 IGHV1-45A0A0A0MS14 117 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 ARHGAP10A1A4S6 786 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 WASHC1A8K0Z3 465 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 A8MUA0 341 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 TGFBR3LH3BV60 316 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 PSMD12O00232 456 aaPredicted RBP10.97□□□□□ -0.65
CUX1-207ENST00000465461 FOXE1O00358 373 aaPredicted RBP10.97□□□□□ -0.65
CUX1-207ENST00000465461 TRIM13O60858 407 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 SEC24DO94855 1032 aaPredicted RBP10.97□□□□□ -0.65
CUX1-207ENST00000465461 MLYCDO95822 493 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 CHRNGP07510 517 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 RNH1P13489 461 aaKnown RBP10.97□□□□□ -0.65
CUX1-207ENST00000465461 HIST1H1TP22492 207 aaPredicted RBP10.97□□□□□ -0.65
CUX1-207ENST00000465461 HMOX2P30519 316 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 SERPINB1P30740 379 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 BSGP35613 385 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 RAB38P57729 211 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 SKP1P63208 163 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 TGM3Q08188 693 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 ABRAXAS2Q15018 415 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 PCOLCEQ15113 449 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 NSDHLQ15738 373 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 NIPAL1Q6NVV3 410 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 TMEM205Q6UW68 189 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 RIPOR1Q6ZS17 1223 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 FRMD7Q6ZUT3 714 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 PTRH1Q86Y79 214 aaKnown RBP10.97□□□□□ -0.65
CUX1-207ENST00000465461 PLPP5Q8NEB5 264 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 MYRIPQ8NFW9 859 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 METTL21AQ8WXB1 218 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 RGMAQ96B86 450 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 FER1L6-AS2Q96M78 137 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 PTCHD1Q96NR3 888 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 OR1F2PQ96R84 312 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 NUDT9Q9BW91 350 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 NPLQ9BXD5 320 aaPredicted RBP10.97□□□□□ -0.65
CUX1-207ENST00000465461 MRPL1Q9BYD6 325 aaKnown RBP10.97□□□□□ -0.65
CUX1-207ENST00000465461 KCNK9Q9NPC2 374 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 ATP13A2Q9NQ11 1180 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 KCMF1Q9P0J7 381 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 DAPP1Q9UN19 280 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 SNX6Q9UNH7 406 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 SLC12A4Q9UP95 1085 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 TP53TG5Q9Y2B4 290 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 FIS1Q9Y3D6 152 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 NUP210LQ5VU65 1888 aa10.97□□□□□ -0.65
CUX1-207ENST00000465461 ITPR1Q14643 2758 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms